Projects per year
Fingerprint The Fingerprint is created by mining the titles and abstracts of the person's research outputs and projects/funding awards to create an index of weighted terms from discipline-specific thesauri.
- 14 Similar Profiles
Galaxies
Medicine & Life Sciences
Workflow
Medicine & Life Sciences
Databases
Medicine & Life Sciences
Proteins
Medicine & Life Sciences
Software
Medicine & Life Sciences
Proteomics
Medicine & Life Sciences
Informatics
Medicine & Life Sciences
Research Personnel
Medicine & Life Sciences
Network
Recent external collaboration on country level. Dive into details by clicking on the dots.
Projects 2016 2020
- 1 Active
A Galaxy-based multi-omic informatics hub for cancer res
Griffin, T. J., Hegeman, A. D., Jagtap, P. D., Johnson, J. E., Lynch, B. J. & Wennblom, T.
NIH NATIONAL CANCER INSTITUTE (NCI)
5/18/16 → 4/30/20
Project: Research project
Galaxies
Informatics
Research Personnel
Neoplasms
Research Output 2000 2019
8
Citations
(Scopus)
Identification of candidate neoantigens produced by fusion transcripts in human osteosarcomas
Rathe, S., Popescu, F. E., Johnson, J. E., Watson, A. L., Marko, T. A., Moriarity, B. S., Ohlfest, J. R. & Largaespada, D. A., Dec 1 2019, In : Scientific reports. 9, 1, 358.Research output: Contribution to journal › Article
Osteosarcoma
RNA Sequence Analysis
Gene Fusion
Immunotherapy
Canidae
1
Citation
(Scopus)
MetaQuantome: An integrated, quantitative metaproteomics approach reveals connections between taxonomy and protein function in complex microbiomes
Easterly, C. W., Sajulga, R., Mehta, S., Johnson, J., Kumar, P., Hubler, S., Mesuere, B., Rudney, J., Griffin, T. J. & Jagtap, P. D., Jan 1 2019, In : Molecular and Cellular Proteomics. 18, 8, p. S82-S91Research output: Contribution to journal › Article
Open Access
Microbiota
Taxonomies
Benchmarking
Proteins
Galaxies
QuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and Informatics
Kumar, P., Panigrahi, P., Johnson, J. E., Weber, W. J., Mehta, S., Sajulga, R., Easterly, C., Crooker, B. A., Heydarian, M., Anamika, K., Griffin, T. J. & Jagtap, P. D., Feb 1 2019, In : Journal of Proteome Research. 18, 2, p. 782-790 9 p.Research output: Contribution to journal › Article
Informatics
Galaxies
Software
Proteins
Visualization
The galaxy platform for reproducible affinity proteomic mass spectrometry data analysis
Stewart, P. A., Kuenzi, B. M., Mehta, S., Kumar, P., Johnson, J. E., Jagtap, P. D., Griffin, T. J. & Haura, E. B., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 249-261 13 p. (Methods in Molecular Biology; vol. 1977).Research output: Chapter in Book/Report/Conference proceeding › Chapter
Galaxies
Proteomics
Mass Spectrometry
Workflow
Software
BAL fluid metaproteome in acute respiratory failure
Jagtap, P. D., Viken, K. J., Johnson, J. E., McGowan, T., Pendleton, K. M., Griffin, T. J., Hunter, R. C., Rudney, J. D. & Bhargava, M., Nov 1 2018, In : American journal of respiratory cell and molecular biology. 59, 5, p. 648-652 5 p.Research output: Contribution to journal › Letter
Open Access
Dimercaprol
Respiratory Insufficiency
Fluids