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  • 7 Similar Profiles
Microbiota Medicine & Life Sciences
Dysbiosis Medicine & Life Sciences
Inflammatory Bowel Diseases Medicine & Life Sciences
Diet Medicine & Life Sciences
Metagenomics Medicine & Life Sciences
Bacteria Medicine & Life Sciences
Anti-Bacterial Agents Medicine & Life Sciences
Genes Medicine & Life Sciences

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Projects 2015 2023

The Alberta FYBER Study

Knights, D.

University of Alberta


Project: Research project

whole grain foods
healthy diet
small cereal grains
dietary fiber

Research Output 2009 2019

1 Citation (Scopus)

An Increased Abundance of Clostridiaceae Characterizes Arthritis in Inflammatory Bowel Disease and Rheumatoid Arthritis: A Cross-sectional Study

Muñiz Pedrogo, D. A., Chen, J., Hillmann, B., Jeraldo, P., Al-Ghalith, G., Taneja, V., Davis, J. M., Knights, D., Nelson, H., Faubion, W. A., Raffals, L. & Kashyap, P. C., Apr 11 2019, In : Inflammatory Bowel Diseases. 25, 5, p. 902-913 12 p.

Research output: Contribution to journalArticle

Inflammatory Bowel Diseases
Rheumatoid Arthritis
Cross-Sectional Studies
Joint Diseases

Characterization of Campylobacter jejuni, Campylobacter upsaliensis, and a novel Campylobacter sp. in a captive non-human primate zoological collection

Clayton, J. B., Danzeisen, J. L., Johnson, T., Trent, A. M., Hayer, S. S., Murphy, T., Wuenschmann, A., Elder, M., Shen, Z., Mannion, A., Bryant, E., Knights, D. & Fox, J. G., Apr 1 2019, In : Journal of Medical Primatology. 48, 2, p. 114-122 9 p.

Research output: Contribution to journalArticle

Campylobacter upsaliensis
Campylobacter jejuni
Host Specificity

Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans

Personalized Microbiome Class Students, Jun 12 2019, In : Cell Host and Microbe. 25, 6, p. 789-802.e5

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Genetic effects on the commensal microbiota in inflammatory bowel disease patients

Aschard, H., Laville, V., Tchetgen, E. T., Knights, D., Imhann, F., Seksik, P., Zaitlen, N., Silverberg, M. S., Cosnes, J., Weersma, R. K., Xavier, R., Beaugerie, L., Skurnik, D. & Sokol, H., Mar 1 2019, In : PLoS genetics. 15, 3, e1008018.

Research output: Contribution to journalArticle

Open Access
inflammatory bowel disease
Inflammatory Bowel Diseases

Microbiome learning Repo (ML Repo): A public repository of microbiome regression and classification tasks

Vangay, P., Hillmann, B. M. & Knights, D., Jan 1 2019, In : GigaScience. 8, 5

Research output: Contribution to journalArticle

Open Access
Learning systems


Data from "Diverse Bacterial Communities Exist on Canine Skin and are Impacted by Cohabitation and Time"

Clayton, J., Danzeisen, J., Johnson, T., Knights, D., Torres, S. M., Ward, T., Huang, H., Data Repository for the University of Minnesota, 2016