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Research Output 1995 2019

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Conference contribution
2009

Entropy-based analysis of chip-sequencing data

Zare, H., Kaveh, M. & Khodursky, A. B., Oct 2 2009, 2009 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2009. 5174339

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription factors
Entropy
Binding sites
Transcription Factors
Binding Sites
2008
6 Citations (Scopus)

A parametric joint model of dna-protein binding, gene expression and dna sequence data to detect target genes of a transcription factor

Pan, W., Wei, P. & Khodursky, A. B., Dec 1 2008, Pacific Symposium on Biocomputing 2008, PSB 2008. p. 465-476 12 p. (Pacific Symposium on Biocomputing 2008, PSB 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription factors
DNA-Binding Proteins
Protein Binding
Gene expression
Transcription Factors
1 Citation (Scopus)

Modeling regulatory sites with higher order position-dependent weight matrices

Zare, H., Kaveh, M. & Khodursky, A. B., Sep 16 2008, 2008 IEEE International Conference on Acoustics, Speech and Signal Processing, ICASSP. p. 629-632 4 p. 4517688

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Binding sites
DNA
deoxyribonucleic acid
matrices
Transcription factors
2007

Transcription factor discovery using support vector machines and heterogeneous data

Barbe, J. F., Tewfik, A. H. & Khodursky, A. B., Dec 1 2007, 5th IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS'07. 4365812. (GENSIPS'07 - 5th IEEE International Workshop on Genomic Signal Processing and Statistics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription factors
Support vector machines
Transcription Factors
Data fusion
Transcription
2006
1 Citation (Scopus)

Gene clustering and gene function prediction using multiple sources of data

Zare, H., Khodursky, A. B. & Kaveh, M., Dec 1 2006, 2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006. p. 113-114 2 p. 4161803. (2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information Storage and Retrieval
Cluster Analysis
Genes
Clustering
Gene