University of Minnesota

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Research Output 1916 2019

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2019

3D Bioprinted In Vitro Metastatic Models via Reconstruction of Tumor Microenvironments

Meng, F., Meyer, C. M., Joung, D., Vallera, D. A., McAlpine, M. & Panoskaltsis-Mortari, A., Jan 1 2019, (Accepted/In press) In : Advanced Materials. 1806899.

Research output: Contribution to journalArticle

Tumors
Cells
Pharmaceutical Preparations
Immunotoxins
Endothelial cells

A Bayesian approach for correcting exposure misclassification in meta-analysis

Lian, Q., Hodges, J. S., Maclehose, R. F. & Chu, H., Jan 15 2019, In : Statistics in Medicine. 38, 1, p. 115-130 16 p.

Research output: Contribution to journalArticle

Bayes Theorem
Misclassification
Bayesian Approach
Meta-Analysis
Observational Study

Abiraterone acetate in combination with androgen deprivation therapy compared to androgen deprivation therapy only for metastatic hormone-sensitive prostate cancer

Sathianathen, N. J., Dahm, P., Brown, S. J., Oestreich, M., Gupta, S., Konety, B. R. & Kunath, F., Jan 24 2019, In : Cochrane Database of Systematic Reviews. 2019, 1, CD013245.

Research output: Contribution to journalArticle

Androgens
Prostatic Neoplasms
Hormones
Therapeutics
Abiraterone Acetate

A Blind Module Identification Approach for Predicting Effective Connectivity Within Brain Dynamical Subnetworks

Karameh, F. N. & Nahas, Z., Jan 30 2019, In : Brain Topography. 32, 1, p. 28-65 38 p.

Research output: Contribution to journalArticle

Seizures
Electroconvulsive Therapy
Brain
Electroencephalography
Nonlinear Dynamics
2 Citations

Abnormal repolarization: A common electrocardiographic finding in patients with epilepsy

Hayashi, K., Kohno, R., Akamatsu, N., Benditt, D. G. & Abe, H., Jan 1 2019, In : Journal of cardiovascular electrophysiology. 30, 1, p. 109-115 7 p.

Research output: Contribution to journalArticle

Epilepsy
Sudden Death
Electrocardiography
Anticonvulsants
Seizures

Accessibility with time and resource constraints: Computing hyper-prisms for sustainable transportation planning

Mahmoudi, M., Song, Y., Miller, H. J. & Zhou, X., Jan 1 2019, In : Computers, Environment and Urban Systems. 73, p. 171-183 13 p.

Research output: Contribution to journalArticle

transportation planning
accessibility
planning
resource
resources

Accessory Traits and Phylogenetic Background Predict Escherichia coli Extraintestinal Virulence Better Than Does Ecological Source

Johnson, J. R., Johnston, B. D., Porter, S., Thuras, P., Aziz, M. & Price, L. B., Jan 1 2019, In : The Journal of infectious diseases. 219, 1, p. 121-132 12 p.

Research output: Contribution to journalArticle

Virulence
Escherichia coli
Uropathogenic Escherichia coli
Capsules
Sepsis

Acculturation and Adherence to Physical Activity Recommendations Among Chinese American and Non-Hispanic White Breast Cancer Survivors

Le, Y., Gao, Z., Gomez, S. L., Pope, Z., Dong, R., Allen, L., Chang, M. W. & Wang, J. H. Y., Feb 15 2019, In : Journal of Immigrant and Minority Health. 21, 1, p. 80-88 9 p.

Research output: Contribution to journalArticle

Acculturation
Asian Americans
Survivors
Exercise
Breast Neoplasms

A Comparison of US and Canadian Osteoporosis Screening and Treatment Strategies in Postmenopausal Women

Crandall, C. J., Larson, J., Manson, J. A. E., Cauley, J. A., LaCroix, A. Z., Wactawski-Wende, J., Datta, M., Sattari, M., Schousboe, J. T., Leslie, W. D. & Ensrud, K. E., Jan 1 2019, (Accepted/In press) In : Journal of Bone and Mineral Research.

Research output: Contribution to journalArticle

Osteoporosis
Advisory Committees
Osteoporotic Fractures
Therapeutics
Bone Density

A conservative scheme for simulation of free-surface turbulent and wave flows

Xuan, A. & Shen, L., Feb 1 2019, In : Journal of Computational Physics. 378, p. 18-43 26 p.

Research output: Contribution to journalArticle

turbulent flow
conservation
Conservation
simulation
Momentum

Activity-Based Protein Profiling Methods to Study Bacteria: The Power of Small-Molecule Electrophiles

Sharifzadeh, S., Shirley, J. D. & Carlson, E. E., Jan 1 2019, In : Current topics in microbiology and immunology. 420, p. 23-48 26 p.

Research output: Contribution to journalArticle

Biological Phenomena
Bacteria
Pharmaceutical Preparations
Proteins
Drug Discovery

Acute AT1R blockade prevents isoproterenol-induced injury in mdx hearts

Meyers, T. A., Heitzman, J. A., Krebsbach, A. M., Aufdembrink, L. M., Hughes, R., Bartolomucci, A. & Townsend, D., Mar 1 2019, In : Journal of Molecular and Cellular Cardiology. 128, p. 51-61 11 p.

Research output: Contribution to journalArticle

Angiotensin Type 1 Receptor
Isoproterenol
Duchenne Muscular Dystrophy
Wounds and Injuries
Heart Injuries

Adaptation, chance, and history in experimental evolution reversals to unicellularity

Rebolleda-Gómez, M. & Travisano, M., Jan 1 2019, In : Evolution. 73, 1, p. 73-83 11 p.

Research output: Contribution to journalArticle

History
history
mutation
Saccharomyces
Mutation

Adaptive perception of changes in affordances for walking on a ship at sea

Walter, H. J., Li, R., Wagman, J. B. & Stoffregen, T., Apr 1 2019, In : Human movement science. 64, p. 28-37 10 p.

Research output: Contribution to journalArticle

Ships
Oceans and Seas
Walking

Addressing the Rural Opioid Addiction and Overdose Crisis Through Cross-Sector Collaboration: Little Falls, Minnesota

Au-Yeung, C., Blewett, L. A. & Lange, K., Feb 1 2019, In : American journal of public health. 109, 2, p. 260-262 3 p.

Research output: Contribution to journalArticle

Opioid Analgesics
Controlled Substances
Law Enforcement
Narcotics
Rural Population

Adjusting the “self” in social interaction: Disability and stigmatization in India

Kayama, M., Johnstone, C. J. & Limaye, S., Jan 1 2019, In : Children and Youth Services Review. 96, p. 463-474 12 p.

Research output: Contribution to journalArticle

Stereotyping
Ego
stigmatization
Interpersonal Relations
India
B-Cell Lymphoma
Non-Hodgkin's Lymphoma
Immunotherapy
Young Adult
Bispecific Antibodies

Advances in Cutaneous Lupus Erythematosus and Dermatomyositis: A Report from the 4th International Conference on Cutaneous Lupus Erythematosus—An Ongoing Need for International Consensus and Collaborations

Concha, J. S. S., Patsatsi, A., Marshak-Rothstein, A., Liu, M. L., Sinha, A. A., Lee, L. A., Merola, J. F., Jabbari, A., Gudjonsson, J. E., Chasset, F., Jarrett, P., Chong, B., Arkin, L., Fernandez, A. P., Caproni, M., Greenberg, S. A., Kim, H. J., Pearson, D. R., Femia, A., Vleugels, R. A. & 4 othersFiorentino, D., Fujimoto, M., Wenzel, J. & Werth, V. P., Feb 1 2019, In : Journal of Investigative Dermatology. 139, 2, p. 270-276 7 p.

Research output: Contribution to journalArticle

Cutaneous Lupus Erythematosus
Dermatomyositis

Adverse Childhood Experiences and Weight Status among Adolescents

Davis, L., Barnes, A. J., Gross, A. C., Ryder, J. R. & Shlafer, R. J., Jan 1 2019, In : Journal of Pediatrics. 204, p. 71-76.e1

Research output: Contribution to journalArticle

Weights and Measures
Morbid Obesity
Obesity
Students
Thinness
1 Citations

A Facial Plastic and Reconstructive Surgery Training Module Using Surgical Simulation for Capacity Building

Fuller, J. C., Justicz, N. S., Kim, J., Cheney, M., Castrillon, R. & Hadlock, T., Jan 1 2019, In : Journal of surgical education. 76, 1, p. 274-280 7 p.

Research output: Contribution to journalArticle

Reconstructive Surgical Procedures
Ecuador
Capacity Building
Plastic Surgery
surgery

A formally verified transformation to unify multiple nested clocks for a Lustre-like language

Shi, G., Zhang, Y., Shang, S., Wang, S., Dong, Y. & Yew, P-C., Jan 1 2019, In : Science China Information Sciences. 62, 1, 12801.

Research output: Contribution to journalArticle

Clocks

A framework for linking resting-state chronnectome/genome features in schizophrenia: A pilot study

Rashid, B., Chen, J., Rashid, I., Damaraju, E., Liu, J., Miller, R., Agcaoglu, O., van Erp, T. G. M., Lim, K. O., Turner, J. A., Mathalon, D. H., Ford, J. M., Voyvodic, J., Mueller, B. A., Belger, A., McEwen, S., Potkin, S. G., Preda, A., Bustillo, J. R., Pearlson, G. D. & 1 othersCalhoun, V. D., Jan 1 2019, In : NeuroImage. 184, p. 843-854 12 p.

Research output: Contribution to journalArticle

Schizophrenia
Single Nucleotide Polymorphism
Genome
Genomics
Psychiatry

A fully integrated digital LDO with built-in adaptive sampling and active voltage positioning using a beat-frequency quantizer

Kundu, S., Liu, M., Wen, S. J., Wong, R. & Kim, C. H., Jan 1 2019, In : IEEE Journal of Solid-State Circuits. 54, 1, p. 109-120 12 p., 8478195.

Research output: Contribution to journalArticle

Sampling
Electric potential
Flip flop circuits
Variable frequency oscillators
Clocks
1 Citations

Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia

Hudzieczek, V., Cegan, R., Cermak, T., Bacovska, N., Machalkova, Z., Dolezal, K., Plihalova, L., Voytas, D. F., Hobza, R. & Vyskot, B., Jan 25 2019, In : New Biotechnology. 48, p. 20-28 9 p.

Research output: Contribution to journalArticle

Silene
Cytokinins
Agrobacterium
Regeneration
DNA

A high-throughput workflow to study remodeling of extracellular matrix-based microtissues

Cummins, K. A., Crampton, A. L. & Wood, D. K., Jan 1 2019, In : Tissue Engineering - Part C: Methods. 25, 1, p. 25-36 12 p.

Research output: Contribution to journalArticle

Workflow
Extracellular Matrix
Throughput
Tissue
Assays

A lentivirus-based system for Cas9/gRNA expression and subsequent removal by Cre-mediated recombination

Carpenter, M. A., Law, E. K., Serebrenik, A., Brown, W. L. & Harris, R., Jan 1 2019, (Accepted/In press) In : Methods.

Research output: Contribution to journalArticle

Guide RNA
Lentivirus
Genetic Recombination
Clustered Regularly Interspaced Short Palindromic Repeats
Genes

Allometric and trait-based patterns in parasite stoichiometry

Paseka, R. & Grunberg, R. L., Jan 1 2019, In : Oikos. 128, 1, p. 102-112 11 p.

Research output: Contribution to journalArticle

stoichiometry
parasite
parasites
fold
body size

A massively-parallel, unstructured overset method for mesh connectivity

Horne, W. J. & Mahesh, K., Jan 1 2019, In : Journal of Computational Physics. 376, p. 585-596 12 p.

Research output: Contribution to journalArticle

mesh
Interpolation
Computational geometry
Communication
interpolation

Ambient Fine Aerosol Concentrations in Multiple Metrics in Taconite Mining Operations

Huynh, T., Ramachandran, G., Quick, H., Hwang, J., Raynor, P. C., Alexander, B. H. & Mandel, J. H., Jan 7 2019, In : Annals of work exposures and health. 63, 1, p. 77-90 14 p.

Research output: Contribution to journalArticle

Aerosols
Air
Particulate Matter
Dust
Calibration

American College of surgeons /Association for Surgical Education Medical Student Simulation-based Surgical Skills Curriculum: Alignment with Entrustable Professional Activities

Steinemann, S., Gardner, A., Aulet, T., Fitzgibbons, S., Campbell, A. & Acton, R. D., Feb 1 2019, In : American journal of surgery. 217, 2, p. 198-204 7 p.

Research output: Contribution to journalArticle

Medical Students
Curriculum
Education
Medical Education
Teaching

American College of surgeons committee on trauma verification level affects trauma center management of pelvic ring injuries and patient mortality

Oliphant, B. W., Tignanelli, C. J., Napolitano, L. M., Goulet, J. A. & Hemmila, M. R., Jan 1 2019, In : Journal of Trauma and Acute Care Surgery. 86, 1, p. 1-10 10 p.

Research output: Contribution to journalArticle

Trauma Centers
Mortality
Wounds and Injuries
Propensity Score
Abbreviated Injury Scale
1 Citations

American Gastroenterological Association Institute Guideline on the Medical Management of Opioid-Induced Constipation

American Gastroenterological Association Institute Clinical Guidelines Committee, Jan 1 2019, In : Gastroenterology. 156, 1, p. 218-226 9 p.

Research output: Contribution to journalArticle

Constipation
Opioid Analgesics
Guidelines
1 Citations

American Gastroenterological Association Institute Technical Review on the Medical Management of Opioid-Induced Constipation

American Gastroenterological Association Institute Clinical Guidelines Committee, Jan 1 2019, In : Gastroenterology. 156, 1, p. 229-253.e5

Research output: Contribution to journalArticle

Constipation
Opioid Analgesics

An algorithm for reliable shortest path problem with travel time correlations

Zhang, Y. & Khani, A., Mar 1 2019, In : Transportation Research Part B: Methodological. 121, p. 92-113 22 p.

Research output: Contribution to journalArticle

Travel time
travel
multiplier
Covariance matrix
Gradient methods

Analysis of the cattle movement network and its association with the risk of bovine tuberculosis at the farm level in Castilla y Leon, Spain

Pozo, P., VanderWaal, K., Grau, A., de la Cruz, M. L., Nacar, J., Bezos, J., Perez, A. M., Minguez, O. & Alvarez, J., Jan 1 2019, In : Transboundary and Emerging Diseases. 66, 1, p. 327-340 14 p.

Research output: Contribution to journalArticle

Bovine Tuberculosis
Castilla
bovine tuberculosis
Spain
farms

Analyzing the impacts of forest disturbance on individual tree diameter increment across the US Lake States

Glasby, M. J., Russell, M. B. & Domke, G. M., Feb 1 2019, In : Environmental Monitoring and Assessment. 191, 2, 56.

Research output: Contribution to journalArticle

Lakes
disturbance
lake
Ecosystems
Fires

An analytical approach for error PMF characterization in approximate circuits

Sengupta, D., Snigdha, F. S., Hu, J. & Sapatnekar, S. S., Jan 1 2019, In : IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems. 38, 1, p. 70-83 14 p., 8283743.

Research output: Contribution to journalArticle

Networks (circuits)
Hardware
Adders
Error analysis
Probability distributions

A national survey of radiation oncologists and urologists on prediction tools and nomograms for localized prostate cancer

Gershman, B., Maroni, P., Tilburt, J. C., Volk, R. J., Konety, B. R., Bennett, C. L., Kutikov, A., Smaldone, M. C., Chen, V. & Kim, S. P., Jan 1 2019, (Accepted/In press) In : World Journal of Urology.

Research output: Contribution to journalArticle

Nomograms
Prostatic Neoplasms
Particle Accelerators
Ownership
Robotics

Anatomy of a late Quaternary carbonate island: Constraints on timing and magnitude of sea-level fluctuations, West Caicos, Turks and Caicos Islands, BWI

Kerans, C., Zahm, C., Bachtel, S. L., Hearty, P. & Cheng, H., Feb 1 2019, In : Quaternary Science Reviews. 205, p. 193-223 31 p.

Research output: Contribution to journalArticle

marine isotope stage
Turk
anatomy
fluctuation
carbonates
1 Citations
asylum seeker
resettlement
refugee
director
climate

A new recombineering system for precise genome-editing in Shewanella oneidensis strain MR-1 using single-stranded oligonucleotides

Corts, A. D., Thomason, L. C., Gill, R. T. & Gralnick, J. A., Dec 1 2019, In : Scientific reports. 9, 1, 39.

Research output: Contribution to journalArticle

Shewanella
Oligonucleotides
DNA
Genetic Conjugation
Genome

An investigation of indirect effects of personality features on anorexia nervosa severity through interoceptive dysfunction in individuals with lifetime anorexia nervosa diagnoses

Duffy, M. E., Rogers, M. L., Joiner, T. E., Bergen, A. W., Berrettini, W., Bulik, C. M., Brandt, H., Crawford, S., Crow, S. J., Fichter, M., Halmi, K., Kaplan, A. S., Klump, K. L., Lilenfeld, L., Magistretti, P. J., Mitchell, J., Schork, N. J., Strober, M., Thornton, L. M., Treasure, J. & 3 othersWoodside, B., Kaye, W. H. & Keel, P. K., Jan 1 2019, (Accepted/In press) In : International Journal of Eating Disorders.

Research output: Contribution to journalArticle

Anorexia Nervosa
Personality
Ceremonial Behavior
Thinness
Body Mass Index

Annealing Temperature Effects on Spin Hall Magnetoresistance in Perpendicularly Magnetized W/CoFeB Bilayers

Peterson, T. J., Sahu, P., Zhang, D., Dc, M. & Wang, J. P., Feb 1 2019, In : IEEE Transactions on Magnetics. 55, 2, 4100204.

Research output: Contribution to journalArticle

Magnetoresistance
Thermal effects
Annealing
Enhanced magnetoresistance
Temperature

Announcing the Journal of Hospital Medicine Editorial Fellowship

Wray, C. M., Olson, A. P., Shah, S. S. & Auerbach, A. D., Jan 1 2019, In : Journal of Hospital Medicine. 14, 1, 1 p.

Research output: Contribution to journalArticle

An N-terminal heterozygous missense CASK mutation is associated with microcephaly and bilateral retinal dystrophy plus optic nerve atrophy

LaConte, L. E. W., Chavan, V., DeLuca, S., Rubin, K., Malc, J., Berry, S. A., Gail Summers, C. & Mukherjee, K., Jan 1 2019, In : American Journal of Medical Genetics, Part A. 179, 1, p. 94-103 10 p.

Research output: Contribution to journalArticle

Retinal Dystrophies
Optic Atrophy
Microcephaly
Missense Mutation
Optic Nerve

A note on quasi-convex functions

Krylov, N. V., Jan 1 2019, In : Journal of Convex Analysis. 26, 1, p. 269-273 5 p.

Research output: Contribution to journalArticle

Quasiconvex Functions
Smooth function
Convex function
Monotone

A Novel Research Method for Determining Sedative Exposure in Critically Ill Patients

Tracy, M. F., Chlan, L., Savik, K., Skaar, D. J. & Weinert, C. R., Jan 1 2019, In : Nursing research. 68, 1, p. 73-79 7 p., 00322.

Research output: Contribution to journalArticle

Hypnotics and Sedatives
Critical Illness
Opioid Analgesics
Research
Clinical Trials
2 Citations

Antifibrotic therapy disrupts stromal barriers and modulates the immune landscape in pancreatic ductal adenocarcinoma

Elahi-Gedwillo, K. Y., Carlson, M., Zettervall, J. & Provenzano, P., Jan 15 2019, In : Cancer Research. 79, 2, p. 372-386 15 p.

Research output: Contribution to journalArticle

Adenocarcinoma
Architectural Accessibility
Pharmaceutical Preparations
Therapeutics
Neoplasms

A panel of eGFP reporters for single base editing by APOBEC-Cas9 editosome complexes

Martin, A. S., Salamango, D. J., Serebrenik, A. A., Shaban, N. M., Brown, W. L. & Harris, R. S., Dec 1 2019, In : Scientific reports. 9, 1, 497.

Research output: Contribution to journalArticle

High-Throughput Nucleotide Sequencing
Human Activities
Catalytic Domain
RNA
Technology