Research Output 1992 2019

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2019
2 Citations (Scopus)

An integrated platform for mucin-type O-glycosylation network generation and visualization

Le, T., O’Brien, C., Gupta, U., Sousa, G., Daoutidis, P. & Hu, W-S., Jun 1 2019, In : Biotechnology and bioengineering. 116, 6, p. 1341-1354 14 p.

Research output: Contribution to journalArticle

Glycosylation
Mucins
Polysaccharides
Visualization
Enzymes

A Tissue- and Temporal-Specific Autophagic Switch Controls Drosophila Pre-metamorphic Nutritional Checkpoints

Pan, X., Neufeld, T. P. & O'Connor, M. B., Sep 9 2019, In : Current Biology. 29, 17, p. 2840-2851.e4

Research output: Contribution to journalArticle

Steroid hormones
autophagy
Autophagy
Drosophila
Switches
1 Citation (Scopus)

Cortex-wide neural interfacing via transparent polymer skulls

Ghanbari, L., Carter, R. E., Rynes, M. L., Dominguez, J., Chen, G., Naik, A., Hu, J., Sagar, M. A. K., Haltom, L., Mossazghi, N., Gray, M. M., West, S. L., Eliceiri, K. W., Ebner, T. J. & Bangalore Kodandaramaiah, S., Dec 1 2019, In : Nature communications. 10, 1, 1500.

Research output: Contribution to journalArticle

Open Access
skull
cortexes
Skull
Polymers
Imaging techniques
2 Citations (Scopus)

Craniobot: A computer numerical controlled robot for cranial microsurgeries

Ghanbari, L., Rynes, M. L., Hu, J., Schulman, D. S., Johnson, G. W., Laroque, M., Shull, G. M. & Bangalore Kodandaramaiah, S., Dec 1 2019, In : Scientific reports. 9, 1, 1023.

Research output: Contribution to journalArticle

Microsurgery
Skull
Craniotomy
Brain
Bone and Bones

Dentin Priming with Amphipathic Antimicrobial Peptides

Moussa, D. G., Kirihara, J. A., Ye, Z., Fischer, N. G., Khot, J., Witthuhn, B. A. & Aparicio, C., Sep 1 2019, In : Journal of dental research. 98, 10, p. 1112-1121 10 p.

Research output: Contribution to journalArticle

Dentin
Peptides
Minerals
Collagen
Multimodal Imaging

Developing a Protein Scaffolding System for Rapid Enzyme Immobilization and Optimization of Enzyme Functions for Biocatalysis

Zhang, G., Johnston, T., Quin, M. B. & Schmidt-Dannert, C., Aug 16 2019, In : ACS Synthetic Biology. 8, 8, p. 1867-1876 10 p.

Research output: Contribution to journalArticle

Biocatalysis
Enzyme immobilization
Biocatalysts
Immobilization
Enzymes

Development of a Biolabeling System Using Ferromagnetic Nanowires

Zhou, W., Um, J., Zhang, Y., Nelson, A. P., Nemati, Z., Modiano, J., Stadler, B. J. & Franklin, R. R., Jun 1 2019, In : IEEE Journal of Electromagnetics, RF and Microwaves in Medicine and Biology. 3, 2, p. 134-142 9 p., 8585028.

Research output: Contribution to journalArticle

Nanowires
nanowires
Cell Separation
Cobalt
Nickel

Development of a cross-reactive monoclonal antibody for detecting the tumor stroma

Hintz, H. M., Cowan, A. E., Shapovalova, M. & LeBeau, A., May 15 2019, In : Bioconjugate Chemistry. 30, 5, p. 1466-1476 11 p.

Research output: Contribution to journalArticle

Monoclonal antibodies
Fibroblasts
Tumors
Immunoglobulin G
Monoclonal Antibodies

Discovery of HSPG2 (Perlecan) as a Therapeutic Target in Triple Negative Breast Cancer

Kalscheuer, S., Khanna, V., Kim, H., Li, S., Sachdev, D., DeCarlo, A., Yang, D. & Panyam, J., Dec 1 2019, In : Scientific reports. 9, 1, 12492.

Research output: Contribution to journalArticle

Open Access
Triple Negative Breast Neoplasms
Antibodies
Antibody-Dependent Cell Cytotoxicity
Therapeutics
Neoplasms
Carboxypeptidase H
Carboxypeptidases
Proinsulin
Insulin
Medical problems
3 Citations (Scopus)

G i/o protein-coupled receptors inhibit neurons but activate astrocytes and stimulate gliotransmission

Durkee, C. A., Covelo, A., Lines, J., Kofuji, P., Aguilar, J. & Araque, A., Jun 1 2019, In : Glia. 67, 6, p. 1076-1093 18 p.

Research output: Contribution to journalArticle

Gi-Go GTP-Binding Protein alpha Subunits
Astrocytes
G-Protein-Coupled Receptors
Neurons
Brain
1 Citation (Scopus)

Glycopolycation-DNA Polyplex Formulation N/P Ratio Affects Stability, Hemocompatibility, and in Vivo Biodistribution

Phillips, H. R., Tolstyka, Z. P., Hall, B. C., Hexum, J. K., Hackett, P. B. & Reineke, T. M., Apr 8 2019, In : Biomacromolecules. 20, 4, p. 1530-1544 15 p.

Research output: Contribution to journalArticle

Methacrylates
DNA
Polymers
Genes
Coagulation
3 Citations (Scopus)

Improving payload capacity and anti-tumor efficacy of mesenchymal stem cells using tat peptide functionalized polymeric nanoparticles

Moku, G., Layek, B., Trautman, L., Putnam, S., Panyam, J. & Prabha, S., Apr 1 2019, In : Cancers. 11, 4, 491.

Research output: Contribution to journalArticle

Open Access
Mesenchymal Stromal Cells
Nanoparticles
Peptides
Trans-Activators
Neoplasms

Intercellular transfer of oncogenic KRAS via tunneling nanotubes introduces intracellular mutational heterogeneity in colon cancer cells

Desir, S., Wong, P., Turbyville, T., Chen, D., Shetty, M., Clark, C., Zhai, E., Romin, Y., Manova-Todorova, K., Starr, T., Nissley, D. V., Steer, C. J., Subramanian, S. & Lou, E., Jul 1 2019, In : Cancers. 11, 7, 892.

Research output: Contribution to journalArticle

Open Access
Kirsten murine sarcoma virus
Nanotubes
Oncogenic Viruses
Parvovirus
Colonic Neoplasms
2 Citations (Scopus)

Mast cells induce blood brain barrier damage in SCD by causing endoplasmic reticulum stress in the endothelium

Tran, H., Mittal, A., Sagi, V., Luk, K., Nguyen, A., Gupta, M., Nguyen, J., Lamarre, Y., Lei, J., Guedes, A. & Gupta, K., Jan 29 2019, In : Frontiers in Cellular Neuroscience. 13, p. 1-12 12 p., 56.

Research output: Contribution to journalArticle

Open Access
Endoplasmic Reticulum Stress
Sickle Cell Anemia
Blood-Brain Barrier
Mast Cells
Endothelium

MCPH1 is essential for cellular adaptation to the G2-phase decatenation checkpoint

Arroyo, M., Kuriyama, R., Guerrero, I., Keifenheim, D., Cañuelo, A., Calahorra, J., Sánchez, A., Clarke, D. J. & Marchal, J. A., Jul 1 2019, In : FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 33, 7, p. 8363-8374 12 p.

Research output: Contribution to journalArticle

G2 Phase Cell Cycle Checkpoints
Mitosis
Ataxia Telangiectasia
Type II DNA Topoisomerase
DNA

Multivalent Ligand Binding to Cell Membrane Antigens: Defining the Interplay of Affinity, Valency, and Expression Density

Csizmar, C. M., Petersburg, J. R., Perry, T. J., Rozumalski, L., Hackel, B. J. & Wagner, C. R., Jan 9 2019, In : Journal of the American Chemical Society. 141, 1, p. 251-261 11 p.

Research output: Contribution to journalArticle

Cell Adhesion Molecules
Cell membranes
Antigens
Ligands
Cell Membrane

Mutation of a Conserved Motif of PP2C.D Phosphatases Confers SAUR Immunity and Constitutive Activity

Wong, J. H., Spartz, A. K., Park, M., Du, M. & Gray, W. M., Sep 1 2019, In : Plant physiology. 181, 1, p. 353-366 14 p.

Research output: Contribution to journalArticle

Open Access
Proton-Translocating ATPases
Phosphoric Monoester Hydrolases
Immunity
immunity
Cell Membrane

Sleeping beauty insertional mutagenesis reveals important genetic drivers of central nervous system embryonal tumors

Beckmann, P. J., Larson, J. D., Larsson, A. T., Ostergaard, J. P., Wagner, S., Rahrmann, E. P., Shamsan, G. A., Otto, G. M., Williams, R. L., Wang, J., Lee, C., Tschida, B. R., Das, P., Dubuc, A. M., Moriarity, B. S., Picard, D., Wu, X., Rodriguez, F. J., Rosemarie, Q., Krebs, R. D. & 13 others, Molan, A. M., Demer, A. M., Frees, M. M., Rizzardi, A. E., Schmechel, S. C., Eberhart, C. G., Jenkins, R. B., Wechsler-Reya, R. J., Odde, D. J., Huang, A., Taylor, M. D., Sarver, A. L. & Largaespada, D. A., Mar 1 2019, In : Cancer Research. 79, 5, p. 905-917 13 p.

Research output: Contribution to journalArticle

Beauty
Central Nervous System Neoplasms
Medulloblastoma
Insertional Mutagenesis
Primitive Neuroectodermal Tumors
1 Citation (Scopus)

Tau is required for progressive synaptic and memory deficits in a transgenic mouse model of α-synucleinopathy

Singh, B., Covelo, A., Martell-Martínez, H., Nanclares, C., Sherman, M. A., Okematti, E., Meints, J., Teravskis, P. J., Gallardo, C., Savonenko, A. V., Benneyworth, M. A., Lesne, S. E., Liao, D., Araque, A. & Lee, M. K., Jan 1 2019, In : Acta Neuropathologica.

Research output: Contribution to journalArticle

Memory Disorders
Transgenic Mice
Lewy Body Disease
Parkinson Disease
Dementia

The DNA deaminase APOBEC3B interacts with the cell-cycle protein CDK4 and disrupts CDK4-mediated nuclear import of cyclin D1

McCann, J. L., Klein, M. M., Leland, E. M., Law, E. K., Brown, W. L., Salamango, D. J. & Harris, R., Jan 1 2019, In : Journal of Biological Chemistry. 294, 32, p. 12099-12111 13 p.

Research output: Contribution to journalArticle

Open Access
Cyclin-Dependent Kinase 4
Cell Cycle Proteins
Cell Nucleus Active Transport
Cyclin D1
Protein Kinases

The impact of TCR signal strength on resident memory T cell formation during influenza virus infection

Fiege, J. K., Stone, I. A., Fay, E. J., Markman, M. W., Wijeyesinghe, S., Macchietto, M., Shen, S., Masopust, D. & Langlois, R. A., Aug 15 2019, In : Journal of Immunology. 203, 4, p. 936-945 10 p.

Research output: Contribution to journalArticle

Virus Diseases
Orthomyxoviridae
Influenza A virus
T-Lymphocytes
Lung
3 Citations (Scopus)

Time-dependent Pax3-mediated chromatin remodeling and cooperation with Six4 and Tead2 specify the skeletal myogenic lineage in developing mesoderm

Magli, A., Baik, J., Mills, L. J., Kwak, I., Dillon, B. S., Mondragon Gonzalez, R., Stafford, D. A., Swanson, S. A., Stewart, R., Thomson, J. A., Garry, D. J., Dynlacht, B. D., Perlingeiro, R. C. R. & Becker, P. B. (ed.), Feb 26 2019, In : PLoS Biology. 17, 2, e3000153.

Research output: Contribution to journalArticle

Open Access
Chromatin Assembly and Disassembly
Mesoderm
Chromatin
chromatin
Homeobox Genes

Transplantation studies reveal internuclear transfer of toxic RNA in engrafted muscles of myotonic dystrophy 1 mice

Mondragon-Gonzalez, R., Azzag, K., Selvaraj, S., Yamamoto, A. & Perlingeiro, R., Sep 1 2019, In : EBioMedicine. 47, p. 553-562 10 p.

Research output: Contribution to journalArticle

Open Access
Myotonic Dystrophy
Poisons
Transfer RNA
Muscle
Muscular Dystrophies
Spiders
Tyrosine 3-Monooxygenase
Central Nervous System
Neurons
Catecholamines
2 Citations (Scopus)

UNC-45A is a novel microtubule-associated protein and regulator of paclitaxel sensitivity in ovarian cancer cells

Mooneyham, A., Iizuka, Y., Yang, Q., Coombes, C., McClellan, M., Shridhar, V., Emmings, E., Shetty, M., Chen, L., Ai, T., Meints, J., Lee, M. K., Gardner, M. K. & Bazzaro, M., Feb 1 2019, In : Molecular Cancer Research. 17, 2, p. 370-383 14 p.

Research output: Contribution to journalArticle

Microtubule-Associated Proteins
Paclitaxel
Ovarian Neoplasms
Spindle Apparatus
Microtubules

UNC-45A is preferentially expressed in epithelial cells and binds to and co-localizes with interphase MTs

Habicht, J., Mooneyham, A., Shetty, M., Zhang, X., Shridhar, V., Winterhoff, B., Zhang, Y., Cepela, J., Starr, T., Lou, E. & Bazzaro, M., 2019, In : Cancer biology & therapy. 20, 10, p. 1304-1313 10 p.

Research output: Contribution to journalArticle

Open Access
Actomyosin
Interphase
Spindle Apparatus
Epithelial Cells
Paclitaxel
2018
5 Citations (Scopus)

Acidic pH-responsive polymer nanoparticles as a TLR7/8 agonist delivery platform for cancer immunotherapy

Kim, H., Sehgal, D., Kucaba, T. A., Ferguson, D. M., Griffith, T. S. & Panyam, J., Nov 28 2018, In : Nanoscale. 10, 44, p. 20851-20862 12 p.

Research output: Contribution to journalArticle

Polymers
Nanoparticles
T-cells
Gases
Antigens
2 Citations (Scopus)

Alignment of collagen matrices using magnetic nanowires and magnetic barcode readout using first order reversal curves (FORC) (invited)

Sharma, A., DiVito, M. D., Shore, D. E., Block, A. D., Pollock, K., Solheid, P., Feinberg, J. M., Modiano, J., Lam, C. H., Hubel, A. & Stadler, B. J. H., Aug 1 2018, In : Journal of Magnetism and Magnetic Materials. 459, p. 176-181 6 p.

Research output: Contribution to journalArticle

collagens
Collagen
Nanowires
readout
nanowires
9 Citations (Scopus)

Bacterial Adhesion to Ultrafiltration Membranes: Role of Hydrophilicity, Natural Organic Matter, and Cell-Surface Macromolecules

Binahmed, S., Hasane, A., Wang, Z., Mansurov, A. & Romero Vargas Castrillon, S., Jan 2 2018, In : Environmental Science and Technology. 52, 1, p. 162-172 11 p.

Research output: Contribution to journalArticle

Hydrophilicity
Ultrafiltration
ultrafiltration
Macromolecules
adhesion
3 Citations (Scopus)

Bimodal sensing of guidance cues in mechanically distinct microenvironments

Tabdanov, E. D. & Provenzano, P., Nov 20 2018, In : Nature Communications.

Research output: Contribution to journalArticle

cues
Fluidics
Cadherins
Cues
Adhesion
1 Citation (Scopus)

Cellular and molecular networking within the ecosystem of cancer cell communication via tunneling nanotubes

Lou, E., Zhai, E., Sarkari, A., Desir, S., Wong, P., Iizuka, Y., Yang, J., Subramanian, S., McCarthy, J., Bazzaro, M. & Steer, C. J., Oct 2 2018, In : Frontiers in Cell and Developmental Biology. 6, OCT, 95.

Research output: Contribution to journalArticle

Open Access
Nanotubes
Cell Communication
Ecosystem
Neoplasms
Interdisciplinary Studies
5 Citations (Scopus)

Comparative toxicity assessment of novel Si quantum dots and their traditional Cd-based counterparts using bacteria models Shewanella oneidensis and Bacillus subtilis

Pramanik, S., Hill, S. K. E., Zhi, B., Hudson-Smith, N. V., Wu, J. J., White, J. N., McIntire, E. A., Kondeti, V. S. S. K., Lee, A. L., Bruggeman, P. J., Kortshagen, U. R. & Haynes, C. L., Jan 1 2018, In : Environmental Science: Nano. 5, 8, p. 1890-1901 12 p.

Research output: Contribution to journalArticle

Bacilli
Cadmium
Semiconductor quantum dots
Toxicity
Bacteria
17 Citations (Scopus)

Continuous treatment with IL-15 exhausts human NK cells via a metabolic defect

Felices, M., Lenvik, A. J., Mc Elmurry, R. T., Chu, S., Hinderlie, P., Bendzick, L., Geller, M. A., Tolar, J., Blazar, B. R. & Miller, J. S., Feb 8 2018, In : JCI Insight. 3, 3

Research output: Contribution to journalArticle

Open Access
Interleukin-15
Natural Killer Cells
Therapeutics
cdc Genes
Fatty Acids
12 Citations (Scopus)

CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula

Curtin, S. J., Xiong, Y., Michno, J. M., Campbell, B. W., Stec, A. O., Čermák, T., Starker, C., Voytas, D. F., Eamens, A. L. & Stupar, R. M., Jun 1 2018, In : Plant Biotechnology Journal. 16, 6, p. 1125-1137 13 p.

Research output: Contribution to journalArticle

Open Access
Clustered Regularly Interspaced Short Palindromic Repeats
Medicago truncatula
Soybeans
Glycine max
RNA
8 Citations (Scopus)

Cross-feeding modulates antibiotic tolerance in bacterial communities

Adamowicz, E. M., Flynn, J., Hunter, R. C. & Harcombe, W., Nov 1 2018, In : ISME Journal. 12, 11, p. 2723-2735 13 p.

Research output: Contribution to journalArticle

Open Access
bacterial communities
antibiotics
tolerance
Ampicillin
ampicillin

Defence responses in the xylem of Ulmus americana cultivars after inoculation with Ophiostoma novo-ulmi

Beier, G. L. & Blanchette, R. A., Dec 1 2018, In : Forest Pathology. 48, 6, e12453.

Research output: Contribution to journalArticle

Ulmus americana
xylem
inoculation
cultivar
cultivars
8 Citations (Scopus)

Engineering Reversible Cell-Cell Interactions with Lipid Anchored Prosthetic Receptors

Csizmar, C. M., Petersburg, J. R., Hendricks, A., Stern, L. A., Hackel, B. J. & Wagner, C. R., Apr 18 2018, In : Bioconjugate Chemistry. 29, 4, p. 1291-1301 11 p.

Research output: Contribution to journalArticle

Open Access
Nanorings
Cell Engineering
Cell membranes
Prosthetics
Cell Communication
3 Citations (Scopus)

Enhanced biodegradation of atrazine by bacteria encapsulated in organically modified silica gels

Benson, J. J., Sakkos, J. K., Radian, A., Wackett, L. P. & Aksan, A., Jan 15 2018, In : Journal of Colloid And Interface Science. 510, p. 57-68 12 p.

Research output: Contribution to journalArticle

Atrazine
Herbicides
Silica Gel
Silica gel
Biodegradation

Increasing Cas9-mediated homology-directed repair efficiency through covalent tethering of DNA repair template

Aird, E. J., Lovendahl, K. N., St Martin, A., Harris, R. & Gordon, W. R., 2018, In : Communications Biology- Nature. 1, 54.

Research output: Contribution to journalArticle

Open Access
Clustered Regularly Interspaced Short Palindromic Repeats
Guide RNA
Ribonucleoproteins
DNA Repair
Genome

Involvement of the VGF-derived peptide TLQP-62 in nerve injury-induced hypersensitivity and spinal neuroplasticity

Skorput, A. G. J., Zhang, X., Waataja, J. J., Peterson, C. D., Riedl, M. S., Kitto, K. F., Truong, H., Huffman, C., Salton, S. R., Fairbanks, C. A., Honda, C. N. & Vulchanova, L., Sep 1 2018, In : Pain. 159, 9, p. 1802-1813 12 p.

Research output: Contribution to journalArticle

Neuronal Plasticity
Hypersensitivity
Neuralgia
Peptides
Spinal Cord
1 Citation (Scopus)

Microtubule-Actomyosin Mechanical Cooperation during Contact Guidance Sensing

Tabdanov, E. D., Puram, V., Zhovmer, A. & Provenzano, P., Oct 9 2018, In : Cell reports. 25, 2, p. 328-338.e6

Research output: Contribution to journalArticle

Actomyosin
Microtubules
Tumors
Cells
Stiffness
16 Citations (Scopus)

Muscle Satellite Cell Cross-Talk with a Vascular Niche Maintains Quiescence via VEGF and Notch Signaling

Verma, M., Asakura, Y., Murakonda, B. S. R., Pengo, T., Latroche, C., Chazaud, B., McLoon, L. K. & Asakura, A., Oct 4 2018, In : Cell Stem Cell. 23, 4, p. 530-543.e9

Research output: Contribution to journalArticle

Muscle Cells
Vascular Endothelial Growth Factor A
Blood Vessels
Endothelial Cells
Muscles
10 Citations (Scopus)
Open Access
Mesenchymal Stromal Cells
Paclitaxel
Pharmaceutical Preparations
Neoplasms
Nanoparticles
17 Citations (Scopus)

Polymeric nanoparticles encapsulating novel TLR7/8 agonists as immunostimulatory adjuvants for enhanced cancer immunotherapy

Kim, H., Niu, L., Larson, P., Kucaba, T. A., Murphy, K. A., James, B. R., Ferguson, D. M., Griffith, T. S. & Panyam, J., May 1 2018, In : Biomaterials. 164, p. 38-53 16 p.

Research output: Contribution to journalArticle

T-cells
Immunotherapy
Nanoparticles
Vaccines
Tumors
1 Citation (Scopus)

Safety and Efficacy of Rose Bengal Derivatives for Glial Scar Ablation in Chronic Spinal Cord Injury

Patil, N., Truong, V., Holmberg, M. H., Lavoie, N. S., McCoy, M. R., Dutton, J. R., Holmberg, E. G. & Parr, A. M., Aug 1 2018, In : Journal of neurotrauma. 35, 15, p. 1745-1754 10 p.

Research output: Contribution to journalArticle

Rose Bengal
Spinal Cord Injuries
Neuroglia
Cicatrix
Safety
18 Citations (Scopus)

Self-Assembling Protein Scaffold System for Easy in Vitro Coimmobilization of Biocatalytic Cascade Enzymes

Zhang, G., Quin, M. B. & Schmidt-Dannert, C., Jun 1 2018, In : ACS Catalysis. 8, 6, p. 5611-5620 10 p.

Research output: Contribution to journalArticle

Scaffolds (biology)
Scaffolds
Enzymes
Proteins
Enzyme immobilization
Open Access
rho-Associated Kinases
Albuminuria
Morphogenesis
Allografts
Fibrosis