Research Computing

Search results

• Huzinaga Projection Embedding for Efficient and Accurate Energies of Systems with Localized Spin-densities

  Graham, D. S., Wen, X., Chulhai, D. & Goodpaster, J. D., Data Repository for the University of Minnesota, May 7 2021

  https://hdl.handle.net/11299/219605

  Dataset

• Comparative genomics approaches accurately predict deleterious variants in plants

  Vonderharr, E., Kono, T., Lei, L., Shih, C. H., Hoffman, P. J., Morrell, P. L. & Fay, J. C., Data Repository for the University of Minnesota, 2018

  DOI: 10.13020/D6N69S, http://hdl.handle.net/11299/198094

  Dataset

• Supporting data for The Fate of Deleterious Variants in a Barley Genomic Prediction Population

  Vonderharr, E., Morrell, P. L., Smith, K. P., Kono, T., Fay, J. C. & Koenig, D., Data Repository for the University of Minnesota, 2018

  DOI: 10.13020/d6w990, http://hdl.handle.net/11299/208553

  Dataset

• A Cell Proliferation and Inflammatory Signature is Induced by Lawsonia intracellularis Infection in Swine

  Leite, F., Abrahante Lloréns, J. E., Vasquez, E. Y., Vannucci, F. A., Gebhart, C. J., Mueller, A., Torrinson, J., Rambo, Z. J. & Isaacson, R., Data Repository for the University of Minnesota, 2018

  DOI: 10.13020/D63M5F, http://hdl.handle.net/11299/198311

  Dataset

• Gigapixel macro photography of tree rings

  Griffin, D., Porter, S. T., Trumper, M. L., Carlson, K., Crawford, D., Schwalen, D. & McFadden, C., Data Repository for the University of Minnesota, Apr 16 2021

  DOI: 10.13020/rep3-nf86, https://hdl.handle.net/11299/219375

  Dataset

• SNP Genotyping Data for the Barley Population in "Registration of the S2MET Barley Mapping Population for Multi-Environment Genomewide Selection"

  Neyhart, J. & Smith, K. P., Data Repository for the University of Minnesota, 2019

  DOI: 10.13020/cp4r-0v95, http://hdl.handle.net/11299/204785

  Dataset

• Historical National Boundaries

  Kropelnicki, J., Johnson, G. & Kne, L., Data Repository for the University of Minnesota, May 11 2022

  https://hdl.handle.net/11299/227302

  Dataset

• Validation of a comprehensive long-read sequencing platform for broad clinical genetic diagnosis

  Sen, S., Handler, H., Victorsen, A., Flaten, Z., Ellison, A., Knutson, T., Munro, S., Martinez, R., Billington, C., Bray, S., Laffin, J., Mroz, P., Yohe, S., Nelson, A., Bower, M. & Thyagarajan, B., ZENODO, Dec 19 2024

  DOI: 10.5281/zenodo.14532102, https://zenodo.org/records/14532102

  Dataset

• Regions of High Confidence in Chinese Hamster and CHO-K1 Genome Assemblies

  Bandyopadhyay, A., Hu, W.-S., Jacob, N. M., Johnson, K., Karypis, G., Le, H., Mudge, J., Onsongo, I. G., Ramaraj, T., Sharma, M., Silverstein, K. A. T., Vishwanathan, N. & Fu, H.-Y., Data Repository for the University of Minnesota, 2016

  DOI: 10.13020/D6Z304, http://dx.doi.org/10.13020/D6Z304

  Dataset

• Variants from "The role of deleterious substitutions in crop genomes"

  Fay, J. C., Fu, F., Hoffman, P. J., Kono, T. J. Y., Liu, C., Mohammadi, M., Morrell, P. L., Smith, K. P., Stupar, R. M. & Tiffin, P., Data Repository for the University of Minnesota, 2016

  DOI: 10.13020/D65C7D, http://doi.org/10.13020/D65C7D

  Dataset

• Barley Genotyping SNPs Annotated using SNPMeta

  Kiran, S., Kono, T. J. Y., Morrell, P. L. & Poland, J. A., Data Repository for the University of Minnesota, 2016

  DOI: 10.13020/D63K53, http://doi.org/10.13020/D63K53

  Dataset

• Alpha-defensin gene single nucleotide polymorphism shapes the gut microbiota

  Herman, A. C., Rashidi, A., Wang, J., Blazar, B. R. & Weisdorf, D. J., Data Repository for the University of Minnesota, 2019

  DOI: 10.13020/9wn7-9142, http://hdl.handle.net/11299/202578

  Dataset

• Maize 509 line TE PAV calls

  Noshay, J., Springer, N. M., Hirsch, C. N., Marand, A. P., Anderson, S. N., Zhou, P., O'Connor, C. H., Crisp, P., Schmitz, R. J. & Lu, Z., Data Repository for the University of Minnesota, 2020

  http://hdl.handle.net/11299/216935

  Dataset

• Withdrawn: Scripts and Files for Endemic and panglobal genetic groups, and divergence of host-associated forms, in world- wide collections of the wheat leaf rust fungus Puccinia triticina as determined by genotype by sequencing.

  Herman, A. C., Data Repository for the University of Minnesota, 2019

  http://hdl.handle.net/11299/208700

  Dataset

• LYVE-1-expressing macrophages modulate the extracellular matrix in the mammary gland and contribute to mammary tumor growth

  Elfstrum, A. K., Rumahorbo, A. H., Nelson, E. V., McCluskey, B. M., Schwertfeger, K. L. & McCluskey, B. M., ZENODO, Sep 6 2023

  DOI: 10.5281/zenodo.8322142, https://zenodo.org/record/8322142

  Dataset

• Digital Surface Model, Minnesota (2006-2012)

  Brink, C., Gosack, B., Kne, L., Luo, Y., Martin, C., McDonald, M., Moore, M., Munsch, A., Palka, S., Piernot, D., Thiede, D., Walz, A. & Xie, Y., Data Repository for the University of Minnesota, 2015

  DOI: 10.13020/D6SG6N, http://dx.doi.org/10.13020/D6SG6N

  Dataset

• Validation of a comprehensive long-read sequencing platform for broad clinical genetic diagnosis

  Sen, S., Handler, H., Victorsen, A., Flaten, Z., Ellison, A., Knutson, T., Munro, S., Martinez, R., Billington, C., Bray, S., Laffin, J., Mroz, P., Yohe, S., Nelson, A., Bower, M. & Thyagarajan, B., ZENODO, Jan 30 2025

  DOI: 10.5281/zenodo.14774810, https://zenodo.org/records/14774810

  Dataset

• VCF file of SNP data of 556 isolates of the wheat leaf rust fungus, Puccinia triticina from 11 world-wide regions

  Kolmer, J., Herman, A. C., Ordonez, M., Germán, S. E., Morgounov, A. & Pretorius, Z., Data Repository for the University of Minnesota, 2019

  DOI: 10.13020/0f8c-k469, http://hdl.handle.net/11299/208672

  Dataset

• Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans

  Anderson, J., Kantar, M. B., Kono, T. J. Y., Morrell, P. L. & Stupar, R. M., Data Repository for the University of Minnesota, 2016

  DOI: 10.13020/D64G6R, http://doi.org/10.13020/D64G6R

  Dataset

• Visualizations from a Magnetohydrodynamic Turbulence model of the Intracluster Medium

  Porter, D. H., Penders, S. & Jones, T. W., Data Repository for the University of Minnesota, 2019

  DOI: 10.13020/y78v-sd76, http://hdl.handle.net/11299/202848

  Dataset

• Validation of a comprehensive long-read sequencing platform for broad clinical genetic diagnosis

  Sen, S., Handler, H., Victorsen, A., Flaten, Z., Ellison, A., Knutson, T., Munro, S., Martinez, R., Billington, C., Bray, S., Laffin, J., Mroz, P., Yohe, S., Nelson, A., Bower, M. & Thyagarajan, B., ZENODO, Feb 4 2025

  DOI: 10.5281/zenodo.14805778, https://zenodo.org/records/14805778

  Dataset

• Data from: A test for rate-coupling of trophic and cranial evolutionary dynamics in New World bats

  Shi, J., Westeen, E. & Rabosky, D., Dryad, 2021

  DOI: 10.5061/dryad.ghx3ffbn3, http://datadryad.org/stash/dataset/doi:10.5061/dryad.ghx3ffbn3 and one more link, https://zenodo.org/record/4495891 (show fewer)

  Dataset

• Twin Cities Historical Surface Waters Based on Original Public Land Survey Maps, 1848 - 1858

  Graves, R., Kernik, M., Kne, L., Mattke, R., Shepard, C. & Strong, R., Data Repository for the University of Minnesota, 2017

  DOI: 10.13020/D6DH3F, https://doi.org/10.13020/D6DH3F

  Dataset

• Solar Insolation, Minnesota (2006-2012)

  Brink, C., Gosack, B., Kne, L., Luo, Y., Martin, C., McDonald, M., Moore, M., Munsch, A., Palka, S., Piernot, D., Thiede, D., Walz, A. & Xie, Y., Data Repository for the University of Minnesota, 2015

  DOI: 10.13020/D6X59X, http://dx.doi.org/10.13020/D6X59X

  Dataset

• An Ecological Study for the Twin Cities Metropolitan Area: Composite Intrinsic Suitability

  Kne, L., Jacobs, P., Barney, R., Tao, Y. & Milz, D. C., Data Repository for the University of Minnesota, 2020

  DOI: 10.13020/dqp3-c961, http://hdl.handle.net/11299/217533

  Dataset