Research Output

2020

A select and resequence approach reveals strain-specific effects of medicago nodule-specific PLAT-domain genes

Burghardt, L. T., Trujillo, D. I., Epstein, B., Tiffin, P. & Young, N. D., Jan 2020, In : Plant physiology. 182, 1, p. 463-471 9 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Barley yellow dwarf virus-PAV is the dominant species causing Barley yellow dwarf disease in South Dakota and Minnesota

Adhikari, A., Lockhart, B. E., Ganiger, M., Byamukama, E., Tande, C., Smith, M. J. & Dill-Macky, R., Aug 2020, In : Crop Protection. 134, 105171.

Research output: Contribution to journalArticle

Biological properties and genomic sequence of an isolate of cherry rasp leaf virus from tomato

Bratsch, S. A., Grinstead, S., Lockhart, B. & Mollov, D., Jan 1 2020, (Accepted/In press) In : Journal of Plant Pathology.

Research output: Contribution to journalArticle

Carbon Amendments Influence Composition and Functional Capacities of Indigenous Soil Microbiomes

Dundore-Arias, J. P., Castle, S. C., Felice, L., Dill-Macky, R. & Kinkel, L. L., Jan 9 2020, In : Frontiers in Molecular Biosciences. 6, 151.

Research output: Contribution to journalArticle

Open Access

Complete genome sequence of aglaonema bacilliform virus (ABV)

Alvarez-Quinto, R. A., Lockhart, B. E. L., Moreno-Martinez, J. M. & Olszewski, N. E., Jan 1 2020, In : Archives of Virology. 165, 1, p. 237-239 3 p.

Research output: Contribution to journalArticle

Corn and soybean host root endophytic fungi with toxicity toward the soybean cyst nematode

Strom, N., Hu, W., Haarith, D., Chen, S. & Bushley, K., Jan 1 2020, In : Phytopathology. 110, 3, p. 603-614 12 p.

Research output: Contribution to journalArticle

Deep-sequencing of Solanum commersonii small RNA libraries reveals riboregulators involved in cold stress response

Esposito, S., Aversano, R., Bradeen, J. M., Di Matteo, A., Villano, C. & Carputo, D., Jan 1 2020, In : Plant Biology. 22, S1, p. 133-142 10 p.

Research output: Contribution to journalArticle

6 Scopus citations

Densities and inhibitory phenotypes among indigenous Streptomyces spp. vary across native and agricultural habitats

Otto-Hanson, L. K. & Kinkel, L. L., Apr 1 2020, In : Microbial ecology. 79, 3, p. 694-705 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Development of barley introgression lines carrying the leaf rust resistance genes Rph1 to Rph15

Martin, M. J., Chicaiza, O., Caffarel, J. C., Sallam, A. H., Druka, A., Waugh, R., Ordon, F., Kopahnke, D., Keilwagen, J., Perovic, D., Fetch, T. G., Jin, Y., Franckowiak, J. D. & Steffenson, B. J., Jan 1 2020, In : Crop Science. 60, 1, p. 282-302 21 p.

Research output: Contribution to journalArticle

Open Access

Fungal symbionts of bark and ambrosia beetles can suppress decomposition of pine sapwood by competing with wood-decay fungi

Skelton, J., Loyd, A., Smith, J. A., Blanchette, R. A., Held, B. W. & Hulcr, J., Jun 2020, In : Fungal Ecology. 45, 100926.

Research output: Contribution to journalArticle

Genetic dissection of Fusarium head blight resistance in spring wheat cv. ‘Glenn’

ElDoliefy, A. E. F. A., Kumar, A., Anderson, J. A., Glover, K. D., Mamidi, S., Elias, E. M., Seetan, R., Alamri, M. S., Kianian, S. F., Sapkota, S., Green, A. & Mergoum, M., May 1 2020, In : Euphytica. 216, 5, 71.

Research output: Contribution to journalArticle

Genetic diversity and phylogeny of strains of Clavibacter nebraskensis associated with recent and historic Goss's wilt epidemics in the north Central USA

Webster, B. T., Curland, R. D., Hirsch, C. D., McNally, R. R., Malvick, D. K. & Ishimaru, C. A., Jan 1 2020, (Accepted/In press) In : Plant Pathology.

Research output: Contribution to journalArticle

Genomic characterization of cycad leaf necrosis virus, the first badnavirus identified in a gymnosperm

Alvarez-Quinto, R. A., Lockhart, B. E. L., Fetzer, J. L. & Olszewski, N. E., Jan 1 2020, (Accepted/In press) In : Archives of Virology.

Research output: Contribution to journalArticle

1 Scopus citations

Inhibitory and nutrient use phenotypes among coexisting Fusarium and Streptomyces populations suggest local coevolutionary interactions in soil

Essarioui, A., LeBlanc, N., Otto-Hanson, L., Schlatter, D. C., Kistler, H. C. & Kinkel, L. L., Mar 1 2020, In : Environmental microbiology. 22, 3, p. 976-985 10 p.

Research output: Contribution to journalArticle

Lady's slipper orchid and hydrangea: New ornamental hosts of tobacco rattle virus (TRV) in Minnesota

Baumann, M. M., Kiambi, R. G. & Lockhart, B. E., Jan 1 2020, In : Plant Health Progress. 21, 1, 34BR.

Research output: Contribution to journalArticle

Localized Genetic and Phenotypic Diversity of Xanthomonas translucens Associated with Bacterial Leaf Streak on Wheat and Barley in Minnesota

Curland, R. D., Gao, L., Hirsch, C. D. & Ishimaru, C. A., Jan 1 2020, In : Phytopathology. 110, 2, p. 257-266 10 p.

Research output: Contribution to journalArticle

Optimizing training population size and content to improve prediction accuracy of FHB-related traits in wheat

Adeyemo, E., Bajgain, P., Conley, E., Sallam, A. H. & Anderson, J. A., Jan 1 2020, In : Agronomy. 10, 4, 543.

Research output: Contribution to journalArticle

Open Access
Open Access
Open Access

Variation in anther extrusion and its impact on fusarium head blight and deoxynivalenol content in oat (Avena sativa L.)

Tekle, S., Schofer, S. S., He, X., Dong, Y. & Bjørnstad, Å., Jan 1 2020, In : Agronomy. 10, 3, 354.

Research output: Contribution to journalArticle

Open Access

Virulence of leaf rust physiological races in Iran from 2010 to 2017

Nemati, Z., Mostowfizadeh-Ghalamfarsa, R., Dadkhodaie, A., Mehrabi, R. & Steffenson, B. J., Jan 1 2020, In : Plant disease. 104, 2, p. 363-372 10 p.

Research output: Contribution to journalArticle

2019

Assessment of biodegradation in ancient archaeological wood from the Middle Cemetery at Abydos, Egypt

Abdel-Azeem, A. M., Held, B. W., Richards, J. E., Davis, S. L. & Blanchette, R. A., Mar 2019, In : PloS one. 14, 3, e0213753.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Biological control of Fusarium crown and root rot of wheat by Streptomyces isolates – It’s complicated

Winter, M., Samuels, P. L., Otto-Hanson, L. K., Dill-Macky, R. & Kinkel, L. L., Jan 1 2019, In : Phytobiomes Journal. 3, 1, p. 52-60 9 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Bulked segregant analysis RNA-seq (BSR-Seq) validated a stem resistance locus in Aegilops umbellulata, a wild relative of wheat

Edae, E. A. & Rouse, M. N., Jan 1 2019, In : PloS one. 14, 9, e0215492.

Research output: Contribution to journalArticle

Open Access

Carbon amendments induce shifts in nutrient use, inhibitory, and resistance phenotypes among soilborne Streptomyces

Dundore-Arias, J. P., Felice, L., DIll-Macky, R. & Kinkel, L. L., Jan 1 2019, In : Frontiers in Microbiology. 10, MAR, 498.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Characterization of Ethiopian Wheat Germplasm for Resistance to Four Puccinia graminis f. sp. tritici Races Facilitated by Single-Race Nurseries

Hundie, B., Girma, B., Tadesse, Z., Edae, E., Olivera, P., Abera, E. H., Bulbula, W. D., Abeyo, B., Badebo, A., Cisar, G., Brown-Guedira, G., Gale, S., Jin, Y. & Rouse, M. N., Sep 1 2019, In : Plant disease. 103, 9, p. 2359-2366 8 p.

Research output: Contribution to journalArticle

Open Access

Characterization of Genetic Resistance to Fusarium Head Blight and Bacterial Leaf Streak in Intermediate Wheatgrass (Thinopyrum intermedium)

Bajgain, P., Zhang, X., Turner, M. K., Curland, R. D., Heim, B., Dill-Macky, R., Ishimaru, C. A. & Anderson, J. A., Aug 3 2019, In : Agronomy. 9, 8, 429.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Characterization of stem, stripe and leaf rust resistance in Tajik bread wheat accessions

Rahmatov, M., Otambekova, M., Muminjanov, H., Rouse, M. N., Hovmøller, M. S., Nazari, K., Steffenson, B. J. & Johansson, E., Feb 1 2019, In : Euphytica. 215, 3, 55.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Characterization of the response of ornamental graminoids to attempted infection by Sclerotinia sclerotiorum

Grabowski, M. A. & Malvick, D. K., Mar 2019, In : Plant disease. 103, 3, p. 411-416 6 p.

Research output: Contribution to journalArticle

Open Access

Classifying cold-stress responses of inbred maize seedlings using RGB imaging

Enders, T. A., St. Dennis, S., Oakland, J., Callen, S. T., Gehan, M. A., Miller, N. D., Spalding, E. P., Springer, N. M. & Hirsch, C. D., Jan 2019, In : Plant Direct. 3, 1, e00104.

Research output: Contribution to journalArticle

Open Access

Complete genome sequence of a previously undescribed badnavirus occurring in Polyscias fruticosa L. (Ming aralia)

Alvarez-Quinto, R. A., Lockhart, B. E. L. & Olszewski, N., Sep 1 2019, In : Archives of Virology. 164, 9, p. 2371-2374 4 p.

Research output: Contribution to journalArticle

Complete genome sequences of Streptomyces spp. isolated from disease-suppressive soils

Heinsch, S. C., Hsu, S. Y., Otto-Hanson, L., Kinkel, L. & Smanski, M. J., Dec 19 2019, In : BMC Genomics. 20, 1, 994.

Research output: Contribution to journalArticle

Open Access
Open Access
2 Scopus citations

Cultural characterization and chlamydospore function of the Ganodermataceae present in the eastern United States

Loyd, A. L., Linder, E. R., Smith, M. E., Blanchette, R. A. & Smith, J. A., Jan 2 2019, In : Mycologia. 111, 1, p. 1-12 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Detection and first report of beet ringspot virus in ornamental Oxalis in the United States

Jordan, R., Mollov, D., Guaragna, M. A. & Lockhart, B., Jul 2019, In : Plant disease. 103, 7, 1 p.

Research output: Contribution to journalArticle

Open Access

Detection of Fusarium Head Blight in wheat using a deep neural network and color imaging

Qiu, R., Yang, C., Moghimi, A., Zhang, M., Steffenson, B. J. & Hirsch, C. D., Nov 1 2019, In : Remote Sensing. 11, 22, 2658.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Disease management and estimated effects on DON (Deoxynivalenol) contamination in Fusarium infested barley

McKee, G., Cowger, C., Dill-Macky, R., Friskop, A., Gautam, P., Ransom, J. & Wilson, W., Jul 2019, In : Agriculture (Switzerland). 9, 7, 155.

Research output: Contribution to journalArticle

Open Access

Dynamic patterns of transcript abundance of transposable element families in maize

Anderson, S. N., Stitzer, M. C., Zhou, P., Ross-Ibarra, J., Hirsch, C. D. & Springer, N. M., Nov 1 2019, In : G3: Genes, Genomes, Genetics. 9, 11, p. 3673-3682 10 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Effects of nutrient supply, herbivory, and host community on fungal endophyte diversity

Seabloom, E. W., Condon, B., Kinkel, L., Komatsu, K. J., Lumibao, C. Y., May, G., McCulley, R. L. & Borer, E. T., Sep 1 2019, In : Ecology. 100, 9, e02758.

Research output: Contribution to journalArticle

2 Scopus citations

Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation

Li, F., Upadhyaya, N. M., Sperschneider, J., Matny, O., Nguyen-Phuc, H., Mago, R., Raley, C., Miller, M. E., Silverstein, K. A. T., Henningsen, E., Hirsch, C. D., Visser, B., Pretorius, Z. A., Steffenson, B. J., Schwessinger, B., Dodds, P. N. & Figueroa, M., Dec 1 2019, In : Nature communications. 10, 1, 5068.

Research output: Contribution to journalArticle

Open Access
5 Scopus citations

Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi

Wu, B., Gaskell, J., Zhang, J., Toapanta, C., Ahrendt, S., Grigoriev, I. V., Blanchette, R. A., Schilling, J. S., Master, E., Cullen, D. & Hibbett, D. S., Jun 1 2019, In : ISME Journal. 13, 6, p. 1391-1403 13 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Expression of the Fusarium graminearum terpenome and involvement of the endoplasmic reticulum-derived toxisome

Flynn, C. M., Broz, K., Jonkers, W., Schmidt-Dannert, C. & Kistler, H. C., Mar 2019, In : Fungal Genetics and Biology. 124, p. 78-87 10 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Genetic diversity of three Israeli wild relatives of wheat from the Sitopsis section of Aegilops

Sela, H., Ezrati, S. & Olivera, P. D., Jan 1 2019, In : Israel Journal of Plant Sciences. 65, 3-4, p. 161-174 14 p.

Research output: Contribution to journalArticle

Genome-wide association mapping of seedling net form net blotch resistance in an ethiopian and eritrean barley collection

Adhikari, A., Steffenson, B. J., Smith, M. J. & Dill-Macky, R., Jul 1 2019, In : Crop Science. 59, 4, p. 1625-1638 14 p.

Research output: Contribution to journalArticle

3 Scopus citations

Genome-wide association study and genomic selection for soybean chlorophyll content associated with soybean cyst nematode tolerance

Ravelombola, W. S., Qin, J., Shi, A., Nice, L., Bao, Y., Lorenz, A., Orf, J. H., Young, N. D. & Chen, S., Nov 27 2019, In : BMC Genomics. 20, 1, 904.

Research output: Contribution to journalArticle

Open Access

Genomic Dissection of Nonhost Resistance to Wheat Stem Rust in Brachypodium distachyon

Coletta, R. D., Hirsch, C. N., Rouse, M. N., Lorenz, A. & Garvin, D. F., Apr 2019, In : Molecular Plant-Microbe Interactions. 32, 4, p. 392-400 9 p.

Research output: Contribution to journalArticle