Research Output 1968 2019

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Letter
2019
2 Citations (Scopus)

A genome-wide algal mutant library and functional screen identifies genes required for eukaryotic photosynthesis

Li, X., Patena, W., Fauser, F., Jinkerson, R. E., Saroussi, S., Meyer, M. T., Ivanova, N., Robertson, J. M., Yue, R., Zhang, R., Vilarrasa-Blasi, J., Wittkopp, T. M., Ramundo, S., Blum, S. R., Goh, A., Laudon, M., Srikumar, T., Lefebvre, P. A., Grossman, A. R. & Jonikas, M. C., Apr 1 2019, In : Nature Genetics. 51, 4, p. 627-635 9 p.

Research output: Contribution to journalLetter

Photosynthesis
Genome
Genes
Libraries
Photosynthetic Reaction Center Complex Proteins

Characterization of a semidominant dwarfing PROCERA allele identified in a screen for CRISPR/Cas9-induced suppressors of loss-of-function alleles

Zhu, Z., Kang, X., Lor, V. S., Weiss, D. & Olszewski, N. E., Feb 1 2019, In : Plant Biotechnology Journal. 17, 2, p. 319-321 3 p.

Research output: Contribution to journalLetter

Clustered Regularly Interspaced Short Palindromic Repeats
Chilo
dwarfing
mutagenesis
Mutagenesis

Direct and indirect effects of climate on richness drive the latitudinal diversity gradient in forest trees

Chu, C., Lutz, J. A., Král, K., Vrška, T., Yin, X., Myers, J. A., Abiem, I., Alonso, A., Bourg, N., Burslem, D. F. R. P., Cao, M., Chapman, H., Condit, R., Fang, S., Fischer, G. A., Gao, L., Hao, Z., Hau, B. C. H., He, Q., Hector, A. & 53 others, Hubbell, S. P., Jiang, M., Jin, G., Kenfack, D., Lai, J., Li, B., Li, X., Li, Y., Lian, J., Lin, L., Liu, Y., Liu, Y., Luo, Y., Ma, K., McShea, W., Memiaghe, H., Mi, X., Ni, M., O'Brien, M. J., de Oliveira, A. A., Orwig, D. A., Parker, G. G., Qiao, X., Ren, H., Reynolds, G., Sang, W., Shen, G., Su, Z., Sui, X., Sun, I. F., Tian, S., Wang, B., Wang, X., Wang, X., Wang, Y., Weiblen, G. D., Wen, S., Xi, N., Xiang, W., Xu, H., Xu, K., Ye, W., Zhang, B., Zhang, J., Zhang, X., Zhang, Y., Zhu, K., Zimmerman, J., Storch, D., Baltzer, J. L., Anderson-Teixeira, K. J., Mittelbach, G. G. & He, F., Feb 1 2019, In : Ecology letters. 22, 2, p. 245-255 11 p.

Research output: Contribution to journalLetter

forest trees
climate
stem
species diversity
stems
2 Citations (Scopus)

Global patterns in fine root decomposition: climate, chemistry, mycorrhizal association and woodiness

See, C. R., Luke McCormack, M., Hobbie, S. E., Flores Moreno, H., Silver, W. L. & Kennedy, P. G., Jun 1 2019, In : Ecology letters. 22, 6, p. 946-953 8 p.

Research output: Contribution to journalLetter

fine root
chemistry
decomposition
climate
degradation
3 Citations (Scopus)

Melanin mitigates the accelerated decay of mycorrhizal necromass with peatland warming

Fernandez, C. W., Heckman, K., Kolka, R. & Kennedy, P. G., Mar 1 2019, In : Ecology letters. 22, 3, p. 498-505 8 p.

Research output: Contribution to journalLetter

melanin
peatlands
peatland
warming
deterioration
2018
8 Citations (Scopus)

Community structure of insect herbivores is driven by conservatism, escalation and divergence of defensive traits in Ficus

Volf, M., Segar, S. T., Miller, S. E., Isua, B., Sisol, M., Aubona, G., Šimek, P., Moos, M., Laitila, J., Kim, J., Zima, J., Rota, J., Weiblen, G. D., Wossa, S., Salminen, J. P., Basset, Y. & Novotny, V., Jan 1 2018, In : Ecology letters. 21, 1, p. 83-92 10 p.

Research output: Contribution to journalLetter

Ficus
herbivore
community structure
herbivores
divergence
9 Citations (Scopus)

Efficient generation of pink-fruited tomatoes using CRISPR/Cas9 system

Deng, L., Wang, H., Sun, C., Li, Q., Jiang, H., Du, M., Li, C. B. & Li, C., Jan 20 2018, In : Journal of Genetics and Genomics. 45, 1, p. 51-54 4 p.

Research output: Contribution to journalLetter

Clustered Regularly Interspaced Short Palindromic Repeats
Lycopersicon esculentum
15 Citations (Scopus)

Ortervirales: New virus order unifying five families of reverse-transcribing viruses

Krupovic, M., Blomberg, J., Coffin, J. M., Dasgupta, I., Fan, H., Geering, A. D., Gifford, R., Harrach, B., Hull, R., Johnson, W., Kreuze, J. F., Lindemann, D., Llorens, C., Lockhart, B., Mayer, J., Muller, E., Olszewski, N. E., Pappu, H. R., Pooggin, M. M., Richert-Pöggeler, K. R. & 10 others, Sabanadzovic, S., Sanfaçon, H., Schoelz, J. E., Seal, S., Stavolone, L., Stoye, J. P., Teycheney, P. Y., Tristem, M., Koonin, E. V. & Kuhn, J. H., Jun 1 2018, In : Journal of virology. 92, 12, e00515-18.

Research output: Contribution to journalLetter

Viruses
viruses
2017
17 Citations (Scopus)

Global biogeography of mating system variation in seed plants

Moeller, D., Briscoe Runquist, R., Moe, A. M., Geber, M. A., Goodwillie, C., Cheptou, P. O., Eckert, C. G., Elle, E., Johnston, M. O., Kalisz, S., Ree, R. H., Sargent, R. D., Vallejo-Marin, M. & Winn, A. A., Mar 1 2017, In : Ecology letters. 20, 3, p. 375-384 10 p.

Research output: Contribution to journalLetter

Spermatophytina
biogeography
mating systems
reproductive strategy
outcrossing
7 Citations (Scopus)

Moving beyond de novo clustering in fungal community ecology

Cline, L. C., Song, Z., Al-Ghalith, G. A., Knights, D. & Kennedy, P. G., Nov 1 2017, In : The New phytologist. 216, 3, p. 629-634 6 p.

Research output: Contribution to journalLetter

Open Access
Soil Microbiology
soil biology
High-Throughput Nucleotide Sequencing
Plant Leaves
community ecology
3 Citations (Scopus)

Soil microbial communities and elk foraging intensity: implications for soil biogeochemical cycling in the sagebrush steppe

Cline, L. C., Zak, D. R., Upchurch, R. A., Freedman, Z. B. & Peschel, A. R., Feb 1 2017, In : Ecology letters. 20, 2, p. 202-211 10 p.

Research output: Contribution to journalLetter

elks
Artemisia
steppes
steppe
microbial communities
2016
6 Citations (Scopus)

A Role for GIBBERELLIN 2-OXIDASE6 and Gibberellins in Regulating Nectar Production

Wiesen, L. B., Bender, R. L., Paradis, T., Larson, A., Perera, M. A. D. N., Nikolau, B. J., Olszewski, N. E. & Carter, C. J., May 2 2016, In : Molecular Plant. 9, 5, p. 753-756 4 p.

Research output: Contribution to journalLetter

2015
27 Citations (Scopus)

Non-transgenic plant genome editing using purified sequence-specific nucleases

Luo, S., Li, J., Stoddard, T. J., Baltes, N. J., Demorest, Z. L., Clasen, B. M., Coffman, A., Retterath, A., Mathis, L., Voytas, D. F. & Zhang, F., Sep 7 2015, In : Molecular Plant. 8, 9, p. 1425-1427 3 p.

Research output: Contribution to journalLetter

Molecular Sequence Data
RNA Editing
RNA editing
Plant Genome
Trans-Activators
136 Citations (Scopus)

Parsing ecological signal from noise in next generation amplicon sequencing

Nguyen, N. H., Smith, D., Peay, K. & Kennedy, P. G., Mar 1 2015, In : New Phytologist. 205, 4, p. 1389-1393 5 p.

Research output: Contribution to journalLetter

Ecological and Environmental Phenomena
DNA Contamination
High-Throughput Nucleotide Sequencing
Signal-To-Noise Ratio
Ecology
2013
2 Citations (Scopus)

Regarding the social-ecological dimensions of caterpillar fungus (Ophiocordyceps sinensis) in the Himalayas - Reply to Shrestha and Bawa

Stewart, M. O., Bushley, K. E. & Yongping, Y., Nov 1 2013, In : Biological Conservation. 167, p. 446-447 2 p.

Research output: Contribution to journalLetter

Ophiocordyceps sinensis
caterpillar
fungus
2009
31 Citations (Scopus)

A recommendation for naming transcription factor proteins in the grasses

Gray, J., Bevan, M., Brutnell, T., Buell, C. R., Cone, K., Hake, S., Jackson, D., Kellogg, E., Lawrence, C., McCouch, S., Mockler, T., Moose, S., Paterson, A., Peterson, T., Rokshar, D., Souza, G. M., Springer, N. M., Stein, N., Timmermans, M., Wang, G. L. & 1 others, Grotewold, E., Jan 1 2009, In : Plant physiology. 149, 1, p. 4-6 3 p.

Research output: Contribution to journalLetter

Plant Proteins
plant proteins
Poaceae
Transcription Factors
transcription factors
2008
126 Citations (Scopus)

Preserving accuracy in GenBank

Bruns, T. D., Blackwell, M., Edwards, I., Taylor, A. F. S., Horton, T., Zhang, N., Kõljalg, U., May, G., Kuyper, T. W., Bever, J. D., Gilbert, G., Taylor, J. W., DeSantis, T. Z., Pringle, A., Borneman, J., Thorn, G., Berbee, M., Mueller, G. M., Andersen, G. L., Vellinga, E. C. & 236 others, Branco, S., Anderson, I., Dickie, I. A., Avis, P., Timonen, S., Kjøller, R., Lodge, D. J., Bateman, R. M., Purvis, A., Crous, P. W., Hawkes, C., Barraclough, T., Burt, A., Nilsson, R. H., Larsson, K. H., Alexander, I., Moncalvo, J. M., Berube, J., Spatafora, J., Thorsten Lumbsch, H., Blair, J. E., Suh, S. O., Pfister, D. H., Binder, M., Boehm, E. W., Kohn, L., Mata, J. L., Dyer, P., Sung, G. H., Dentinger, B., Simmons, E. G., Baird, R. E., Volk, T. J., Perry, B. A., Kerrigan, R. W., Campbell, J., Rajesh, J., Reynolds, D. R., Geiser, D., Humber, R. A., Hausmann, N., Szaro, T., Stajich, J., Gathman, A., Peay, K. G., Henkel, T., Robinson, C. H., Pukkila, P. J., Nguyen, N. H., Villalta, C., Kennedy, P., Bergemann, S., Catherine Aime, M., Kauff, F., Porras-Alfaro, A., Gueidan, C., Beck, A., Andersen, B., Marek, S., Crouch, J. A., Kerrigan, J., Beagle Ristaino, J., Hodge, K. T., Kuldau, G., Samuels, G. J., Raja, H. A., Voglmayr, H., Gardes, M., Janos, D. P., Rogers, J. D., Cannon, P., Woolfolk, S. W., Kistler, H. C., Castellano, M. A., Maldonado-Ramírez, S. L., Kirk, P. M., Farrar, J. J., Osmundson, T., Currah, R. S., Vujanovic, V., Chen, W., Korf, R. P., Atallah, Z. K., Harrison, K. J., Guarro, J., Bates, S. T., Enrico Bonello, P., Bridge, P., Schell, W., Rossi, W., Stenlid, J., Frisvad, J. C., Miller, R. M., Baker, S. E., Hallen, H. E., Janso, J. E., Wilson, A. W., Conway, K. E., Egerton-Warburton, L., Wang, Z., Eastburn, D., Hong Ho, W. W., Kroken, S., Stadler, M., Turgeon, G., Lichtwardt, R. W., Stewart, E. L., Wedin, M., Li, D. W., Uchida, J. Y., Jumpponen, A., Deckert, R. J., Beker, H. J., Rogers, S. O., Xu, J., Johnston, P., Shoemaker, R. A., Liu, M., Marques, G., Summerell, B., Sokolski, S., Thrane, U., Widden, P., Bruhn, J. N., Bianchinotti, V., Tuthill, D., Baroni, T. J., Barron, G., Hosaka, K., Jewell, K., Piepenbring, M., Sullivan, R., Griffith, G. W., Bradley, S. G., Aoki, T., Yoder, W. T., Ju, Y. M., Berch, S. M., Trappe, M., Duan, W., Bonito, G., Taber, R. A., Coelho, G., Bills, G., Ganley, A., Agerer, R., Nagy, L., Roy, B. A., Læssøe, T., Hallenberg, N., Tichy, H. V., Stalpers, J., Langer, E., Scholler, M., Krueger, D., Pacioni, G., Pöder, R., Pennanen, T., Capelari, M., Nakasone, K., Tewari, J. P., Miller, A. N., Decock, C., Huhndorf, S., Wach, M., Vishniac, H. S., Yohalem, D. S., Smith, M. E., Glenn, A. E., Spiering, M., Lindner, D. L., Schoch, C., Redhead, S. A., Ivors, K., Jeffers, S. N., Geml, J., Okafor, F., Spiegel, F. W., Dewsbury, D., Carroll, J., Porter, T. M., Pashley, C., Carpenter, S. E., Abad, G., Voigt, K., Arenz, B., Methven, A. S., Schechter, S., Vance, P., Mahoney, D., Kang, S., Rheeder, J. P., Mehl, J., Greif, M., Ndzi Ngala, G., Ammirati, J., Kawasaki, M., Gwo-Fang, Y., Matsumoto, T., Smith, D., Koenig, G., Luoma, D., May, T., Leonardi, M., Sigler, L., Taylor, D. L., Gibson, C., Sharpton, T., Hawksworth, D. L., Carmine Dianese, J., Trudell, S. A., Paulus, B., Padamsee, M., Callac, P., Lima, N., White, M., Barreau, C., Juncai, M. A., Buyck, B., Rabeler, R. K., Liles, M. R., Estes, D., Carter, R., Herr, J. M., Chandler, G., Kerekes, J., Cruse-Sanders, J., Galán Márquez, R., Horak, E., Fitzsimons, M., Döring, H., Yao, S., Hynson, N., Ryberg, M., Arnold, A. E. & Hughes, K., Mar 21 2008, In : Science. 319, 5870, 1 p.

Research output: Contribution to journalLetter

2 Citations (Scopus)

Science 2.0: Not so new?

Yoder, J. B., Jun 6 2008, In : Science. 320, 5881, 1 p.

Research output: Contribution to journalLetter

Internet
Research
2006

Author's response [2]

Weiblen, G. D., Nov 1 2006, In : Journal of Forensic Sciences. 51, 6, 1 p.

Research output: Contribution to journalLetter

2001
22 Citations (Scopus)

Development and characterization of genome-wide single nucleotide polymorphism markers in the green alga Chlamydomonas reinhardtii [2]

Vysotskaia, V. S., Curtis, D. E., Voinov, A. V., Kathir, P., Silflow, C. D. & Lefebvre, P. A., Jan 1 2001, In : Plant physiology. 127, 2, p. 386-389 4 p.

Research output: Contribution to journalLetter