Research Output

2015

Heterozygous mutations in natriuretic peptide receptor-B (NPR2) gene as a cause of short stature

Wang, S. R., Jacobsen, C. M., Carmichael, H., Edmund, A. B., Robinson, J. W., Olney, R. C., Miller, T. C., Moon, J. E., Mericq, V., Potter, L. R., Warman, M. L., Hirschhorn, J. N. & Dauber, A., Apr 1 2015, In : Human mutation. 36, 4, p. 474-481 8 p.

Research output: Contribution to journalArticle

41 Scopus citations

Metaproteomic analysis using the Galaxy framework

Jagtap, P. D., Blakely, A., Murray, K., Stewart, S., Kooren, J., Johnson, J. E., Rhodus, N. L., Rudney, J. & Griffin, T. J., Oct 2015, In : Proteomics. 15, 20, p. 3553-3565 13 p.

Research output: Contribution to journalArticle

34 Scopus citations

MTORC1 phosphorylates UVRAG to negatively regulate autophagosome and endosome maturation

Kim, Y. M., Jung, C. H., Seo, M., Kim, E. K., Park, J. M., Bae, S. S. & Kim, D. H., Jan 22 2015, In : Molecular Cell. 57, 2, p. 207-218 12 p.

Research output: Contribution to journalArticle

92 Scopus citations

Multi-omic data analysis using Galaxy

Boekel, J., Chilton, J. M., Cooke, I. R., Horvatovich, P. L., Jagtap, P. D., Käll, L., Lehtiö, J., Lukasse, P., Moerland, P. D. & Griffin, T. J., Feb 2015, In : Nature biotechnology. 33, 2, p. 137-139 3 p.

Research output: Contribution to journalLetter

64 Scopus citations

T Cell-Expressed CD40L potentiates the bone anabolic activity of intermittent PTH treatment

Robinson, J. W., Li, J. Y., Walker, L. D., Tyagi, A. M., Reott, M. A., Yu, M., Adams, J., Weitzmann, M. N. & Pacifici, R., Apr 1 2015, In : Journal of Bone and Mineral Research. 30, 4, p. 695-705 11 p.

Research output: Contribution to journalArticle

17 Scopus citations

The human saliva proteome: Overview and emerging methods for characterization

Griffin, T. J., Jan 1 2015, Advances in Global Health Through Sensing Technologies 2015. Southern, S. O., Gartner, C., Stallings, J. D. & Rodriguez-Chavez, I. R. (eds.). SPIE, Vol. 9490. 949003

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry to detect monoclonal immunoglobulin light chains in serum and urine

Barnidge, D. R., Krick, T. P., Griffin, T. J. & Murray, D. L., Nov 15 2015, In : Rapid Communications in Mass Spectrometry. 29, 21, p. 2057-2060 4 p.

Research output: Contribution to journalArticle

12 Scopus citations
2014

Dephosphorylation and inactivation of NPR2 guanylyl cyclase in granulosa cells contributes to the LH-induced decrease in cGMP that causes resumption of meiosis in rat oocytes

Egbert, J. R., Shuhaibar, L. C., Edmund, A. B., Van Helden, D. A., Robinson, J. W., Uliasz, T. F., Baena, V., Geerts, A., Wunder, F., Potter, L. R. & Jaffe, L. A., Sep 2014, In : Development (Cambridge). 141, 18, p. 3594-3604 11 p.

Research output: Contribution to journalArticle

48 Scopus citations

Hepatic ATGL mediates PPAR-α signaling and fatty acid channeling through an L-FABP independent mechanism

Ong, K. T., Mashek, M. T., Davidson, N. O. & Mashek, D. G., May 2014, In : Journal of Lipid Research. 55, 5, p. 808-815 8 p.

Research output: Contribution to journalArticle

26 Scopus citations

Human saliva proteome: An overview

Griffin, T. J., Jan 1 2014, Sensing Technologies for Global Health, Military Medicine, and Environmental Monitoring IV. SPIE, 91120B. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 9112).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Improved intensity-based label-free quantification via proximity-based intensity normalization (PIN)

Van Riper, S. K., de Jong, E., Higgins, L., Carlis, J. V. & Griffin, T. J., Mar 7 2014, In : Journal of Proteome Research. 13, 3, p. 1281-1292 12 p.

Research output: Contribution to journalArticle

4 Scopus citations
17 Scopus citations

Regulation of intraocular pressure by soluble and membrane guanylate cyclases and their role in glaucoma

Buys, E. S., Potter, L. R., Pasquale, L. R. & Ksander, B. R., May 19 2014, In : Frontiers in Molecular Neuroscience. 7, MAY, 38.

Research output: Contribution to journalReview article

24 Scopus citations

Serum TAG analysis differentiates between genetic and obesity-associated NAFLD

Mashek, D. G. & Greenberg, A. S., Jan 1 2014, In : Diabetes. 63, 1, p. 42-44 3 p.

Research output: Contribution to journalComment/debate

5 Scopus citations

The ZZ domain of dystrophin in DMD: Making sense of missense mutations

Vulin, A., Wein, N., Strandjord, D. M., Johnson, E. K., Findlay, A. R., Maiti, B., Howard, M. T., Kaminoh, Y. J., Taylor, L. E., Simmons, T. R., Ray, W. C., Montanaro, F., Ervasti, J. M. & Flanigan, K. M., Feb 1 2014, In : Human mutation. 35, 2, p. 257-264 8 p.

Research output: Contribution to journalArticle

12 Scopus citations
22 Scopus citations
2013

Actin Isoforms in Neuronal Development and Function

Cheever, T. R. & Ervasti, J. M., 2013, International Review of Cell and Molecular Biology. Elsevier Inc., p. 157-213 57 p. (International Review of Cell and Molecular Biology; vol. 301).

Research output: Chapter in Book/Report/Conference proceedingChapter

18 Scopus citations

A human skeletal overgrowth mutation increases maximal velocity and blocks desensitization of guanylyl cyclase-B

Robinson, J. W., Dickey, D. M., Miura, K., Michigami, T., Ozono, K. & Potter, L. R., Oct 1 2013, In : Bone. 56, 2, p. 375-382 8 p.

Research output: Contribution to journalArticle

14 Scopus citations

Algal swimming velocities signal fatty acid accumulation

Hansen, T. J., Hondzo, M., Mashek, M. T., Mashek, D. & Lefebvre, P. A., Jan 2013, In : Biotechnology and bioengineering. 110, 1, p. 143-152 10 p.

Research output: Contribution to journalArticle

5 Scopus citations

A two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies

Jagtap, P., Goslinga, J., Kooren, J. A., Mcgowan, T., Wroblewski, M. S., Seymour, S. L. & Griffin, T. J., Apr 1 2013, In : Proteomics. 13, 8, p. 1352-1357 6 p.

Research output: Contribution to journalArticle

100 Scopus citations

Compound loss of muscleblind-like function in myotonic dystrophy

Lee, K. Y., Li, M., Manchanda, M., Batra, R., Charizanis, K., Mohan, A., Warren, S. A., Chamberlain, C. M., Finn, D., Hong, H., Ashraf, H., Kasahara, H., Ranum, L. P. W. & Swanson, M. S., Dec 2013, In : EMBO Molecular Medicine. 5, 12, p. 1887-1900 14 p.

Research output: Contribution to journalArticle

74 Scopus citations

Distinct functions of Ulk1 and Ulk2 in the regulation of lipid metabolism in adipocytes

Ro, S. H., Jung, C. H., Hahn, W. S., Xu, X., Kim, Y. M., Yun, Y. S., Park, J. M., Kim, K. H., Seo, M., Ha, T. Y., Arriaga, E. A., Bernlohr, D. A. & Kim, D. H., Dec 1 2013, In : Autophagy. 9, 12, p. 2103-2114 12 p.

Research output: Contribution to journalArticle

38 Scopus citations

DRAGging amino Acid-mTORC1 signaling by SH3BP4

Kim, Y. M. & Kim, D. H., Jan 1 2013, In : Molecules and cells. 35, 1, p. 1-6 6 p.

Research output: Contribution to journalReview article

8 Scopus citations

Erratum: Statement of retraction (Diabetes (2012) 61 (3114-3125))

Zhang, W., Zhang, X., Wang, H., Guo, X., Li, H., Wang, Y., Xu, X., Tan, L., Mashek, M. T., Zhang, C., Chen, Y., Mashek, D. G., Foretz, M., Zhu, C., Zhou, H., Liu, X., Viollet, B., Wu, C. & Huo, Y., Mar 1 2013, In : Diabetes. 62, 3, 1 p.

Research output: Contribution to journalComment/debate

Hepatic ATGL knockdown uncouples glucose intolerance from liver TAG accumulation

Ong, K. T., Mashek, M. T., Bu, S. Y. & Mashek, D. G., Jan 1 2013, In : FASEB Journal. 27, 1, p. 313-321 9 p.

Research output: Contribution to journalArticle

29 Scopus citations

Hepatic fatty acid trafficking: Multiple forks in the road

Mashek, D. G., Jan 1 2013, In : Advances in Nutrition. 4, 6, p. 697-710 14 p.

Research output: Contribution to journalReview article

48 Scopus citations

Identification of New Dystroglycan Complexes in Skeletal Muscle

Johnson, E. K., Li, B., Yoon, J. H., Flanigan, K. M., Martin, P. T., Ervasti, J. & Montanaro, F., Aug 8 2013, In : PloS one. 8, 8, e73224.

Research output: Contribution to journalArticle

24 Scopus citations

Mass spectrometry-based proteomics: Basic principles and emerging technologies and directions

Van Riper, S. K., De Jong, E. P., Carlis, J. V. & Griffin, T. J., 2013, Radiation Proteomics: The Effects of Ionizing and Non-Ionizing Radiation on Cells and Tissues. Springer New York LLC, p. 1-35 35 p. (Advances in Experimental Medicine and Biology; vol. 990).

Research output: Chapter in Book/Report/Conference proceedingChapter

21 Scopus citations

Natriuretic Peptides, Their Receptors and Therapeutic Applications

Barbieri, K. & Potter, L. R., Feb 15 2013, Encyclopedia of Biological Chemistry: Second Edition. Elsevier Inc., p. 225-228 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

New lipid-producing, cold-tolerant yellow-green alga isolated from the rocky mountains of Colorado

Nelson, D. R., Mengistu, S., Ranum, P., Celio, G., Mashek, M., Mashek, D. & Lefebvre, P. A., Jul 1 2013, In : Biotechnology Progress. 29, 4, p. 853-861 9 p.

Research output: Contribution to journalArticle

7 Scopus citations

Rapamycin inhibits both motility through down-regulation of p-STAT3 (S727) by disrupting the mTORC2 assembly and peritoneal dissemination in sarcomatoid cholangiocarcinoma

Hong, S. M., Park, C. W., Cha, H. J., Kwon, J. H., Yun, Y. S., Lee, N. G., Kim, D. G., Nam, H. G. & Choi, K. Y., Feb 1 2013, In : Clinical and Experimental Metastasis. 30, 2, p. 177-187 11 p.

Research output: Contribution to journalArticle

16 Scopus citations

The proteome of human saliva

Griffin, T. J., Aug 12 2013, Sensing Technologies for Global Health, Military Medicine, and Environmental Monitoring III. 87230A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8723).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Toll-like receptor 4 signaling is required for induction of gluconeogenic gene expression by palmitate in human hepatic carcinoma cells

Mamedova, L. K., Yuan, K., Laudick, A. N., Fleming, S. D., Mashek, D. G. & Bradford, B. J., Aug 1 2013, In : Journal of Nutritional Biochemistry. 24, 8, p. 1499-1507 9 p.

Research output: Contribution to journalArticle

14 Scopus citations

β-actin and fascin-2 cooperate to maintain stereocilia length

Perrin, B. J., Strandjord, D. M., Narayanan, P., Henderson, D. M., Johnson, K. R. & Ervasti, J. M., May 13 2013, In : Journal of Neuroscience. 33, 19, p. 8114-8121 8 p.

Research output: Contribution to journalArticle

39 Scopus citations
2012

AMP-activated protein kinase α1 protects against diet-induced insulin resistance and obesity

Zhang, W., Zhang, X., Wang, H., Guo, X., Li, H., Wang, Y., Xu, X., Tan, L., Mashek, M. T., Zhang, C., Chen, Y., Mashek, D., Foretz, M., Zhu, C., Zhou, H., Liu, X., Viollet, B., Wu, C. & Huo, Y., Dec 1 2012, In : Diabetes. 61, 12, p. 3114-3125 12 p.

Research output: Contribution to journalArticle

32 Scopus citations

Crystal structure of the Gtr1pGTP-Gtr2pGDP protein complex reveals large structural rearrangements triggered by GTP-to-GDP conversion

Jeong, J. H., Lee, K. H., Kim, Y-M., Kim, D-H., Oh, B. H. & Kim, Y. G., Aug 24 2012, In : Journal of Biological Chemistry. 287, 35, p. 29648-29653 6 p.

Research output: Contribution to journalArticle

40 Scopus citations

Deep metaproteomic analysis of human salivary supernatant

Jagtap, P., Mcgowan, T., Bandhakavi, S., Tu, Z. J., Seymour, S., Griffin, T. J. & Rudney, J. D., Apr 1 2012, In : Proteomics. 12, 7, p. 992-1001 10 p.

Research output: Contribution to journalArticle

53 Scopus citations

Emerging non-invasively collected genomic and proteomic biomarkers for the early diagnosis of oral squamous cell carcinoma (OSCC)

Kooren, J. A., Rhodus, N. L. & Griffin, T. J., Dec 1 2012, Squamous Cell Carcinoma. Nova Science Publishers, Inc., p. 197-210 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Fibroblast Growth Factor Receptor 1 Activation in Mammary Tumor Cells Promotes Macrophage Recruitment in a CX3CL1-Dependent Manner

Reed, J. R., Stone, M. D., Beadnell, T. C., Ryu, Y., Griffin, T. J. & Schwertfeger, K. L., Sep 24 2012, In : PloS one. 7, 9, e45877.

Research output: Contribution to journalArticle

29 Scopus citations

Galbanic acid decreases androgen receptor abundance and signaling and induces G 1 arrest in prostate cancer cells

Zhang, Y., KIM, KWAN. HYUN., Zhang, W., Guo, Y., Kim, S. H. & Lü, J., Jan 11 2012, In : International Journal of Cancer. 130, 1, p. 200-212 13 p.

Research output: Contribution to journalArticle

18 Scopus citations
19 Scopus citations

Guanylyl cyclases A and B are asymmetric dimers that are allosterically activated by ATP binding to the catalytic domain

Robinson, J. W. & Potter, L. R., Sep 4 2012, In : Science signaling. 5, 240, ra65.

Research output: Contribution to journalArticle

21 Scopus citations

Impacts of dystrophin and utrophin domains on actin structural dynamics: Implications for therapeutic design

Lin, A. Y., Prochniewicz, E., Henderson, D. M., Li, B., Ervasti, J. M. & Thomas, D. D., Jun 29 2012, In : Journal of Molecular Biology. 420, 1-2, p. 87-98 12 p.

Research output: Contribution to journalArticle

14 Scopus citations

Luteinizing hormone reduces the activity of the NPR2 guanylyl cyclase in mouse ovarian follicles, contributing to the cyclic GMP decrease that promotes resumption of meiosis in oocytes

Robinson, J. W., Zhang, M., Shuhaibar, L. C., Norris, R. P., Geerts, A., Wunder, F., Eppig, J. J., Potter, L. R. & Jaffe, L. A., Jun 15 2012, In : Developmental Biology. 366, 2, p. 308-316 9 p.

Research output: Contribution to journalArticle

87 Scopus citations

Mouse model of muscleblind-like 1 overexpression: Skeletal muscle effects and therapeutic promise

Chamberlain, C. M. & Ranum, L. P. W., Nov 1 2012, In : Human molecular genetics. 21, 21, p. 4645-4654 10 p., dds306.

Research output: Contribution to journalArticle

42 Scopus citations

Multi-isotope imaging mass spectrometry reveals slow protein turnover in hair-cell stereocilia

Zhang, D. S., Piazza, V., Perrin, B. J., Rzadzinska, A. K., Poczatek, J. C., Wang, M., Prosser, H. M., Ervasti, J. M., Corey, D. P. & Lechene, C. P., Jan 26 2012, In : Nature. 481, 7382, p. 520-524 5 p.

Research output: Contribution to journalArticle

123 Scopus citations

Online nanoscale ERLIC-MS outperforms RPLC-MS for shotgun proteomics in complex mixtures

De Jong, E. P. & Griffin, T. J., Oct 5 2012, In : Journal of Proteome Research. 11, 10, p. 5059-5064 6 p.

Research output: Contribution to journalArticle

18 Scopus citations

Palmitoleate induces hepatic steatosis but suppresses liver inflammatory response in mice

Guo, X., Li, H., Xu, H., Halim, V., Zhang, W., Wang, H., Ong, K. T., Woo, S. L., Walzem, R. L., Mashek, D. G., Dong, H., Lu, F., Wei, L., Huo, Y. & Wu, C., Jun 29 2012, In : PloS one. 7, 6, e39286.

Research output: Contribution to journalArticle

82 Scopus citations

Protein carbonylation and adipocyte mitochondrial function

Curtis, J. M., Hahn, W. S., Stone, M. D., Inda, J. J., Droullard, D. J., Kuzmicic, J. P., Donoghue, M. A., Long, E. K., Armien, A. G., Lavandero, S., Arriaga, E., Griffin, T. J. & Bernlohr, D. A., Sep 21 2012, In : Journal of Biological Chemistry. 287, 39, p. 32967-32980 14 p.

Research output: Contribution to journalArticle

43 Scopus citations