Research Output

Short survey

Advances in Proteome Analysis by Mass Spectrometry

Griffin, T. J. & Aebersold, R., Dec 7 2001, In : Journal of Biological Chemistry. 276, 49, p. 45497-45500 4 p.

Research output: Contribution to journalShort survey

128 Scopus citations

CNP, cardiac natriuretic peptide?

Potter, L. R., May 1 2004, In : Endocrinology. 145, 5, p. 2129-2130 2 p.

Research output: Contribution to journalShort survey

11 Scopus citations

"Corination" of the proANP converting enzyme

Potter, L. R., Feb 1 2005, In : Cell Metabolism. 1, 2, p. 88-90 3 p.

Research output: Contribution to journalShort survey

9 Scopus citations

Guanylyl Cyclase-linked Natriuretic Peptide Receptors: Structure and Regulation

Potter, L. R. & Hunter, T., Mar 2 2001, In : Journal of Biological Chemistry. 276, 9, p. 6057-6060 4 p.

Research output: Contribution to journalShort survey

165 Scopus citations

Oxidative stress and covalent modification of protein with bioactive aldehydes

Grimsrud, P. A., Xie, H., Griffin, T. J. & Bernlohr, D. A., Aug 8 2008, In : Journal of Biological Chemistry. 283, 32, p. 21837-21841 5 p.

Research output: Contribution to journalShort survey

337 Scopus citations
Review article

Breaking fat: The regulation and mechanisms of lipophagy

Schulze, R. J., Sathyanarayan, A. & Mashek, D. G., Oct 2017, In : Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1862, 10, p. 1178-1187 10 p.

Research output: Contribution to journalReview article

Open Access
45 Scopus citations

Congenital diaphragmatic hernias: From genes to mechanisms to therapies

Kardon, G., Ackerman, K. G., McCulley, D. J., Shen, Y., Wynn, J., Shang, L., Bogenschutz, E., Sun, X. & Chung, W. K., Aug 1 2017, In : DMM Disease Models and Mechanisms. 10, 8, p. 955-970 16 p.

Research output: Contribution to journalReview article

Open Access
28 Scopus citations
48 Scopus citations

DRAGging amino Acid-mTORC1 signaling by SH3BP4

Kim, Y. M. & Kim, D. H., Jan 1 2013, In : Molecules and cells. 35, 1, p. 1-6 6 p.

Research output: Contribution to journalReview article

8 Scopus citations

Dynamic range compression: A solution for proteomic biomarker discovery?

Griffin, T. J. & Bandhakavi, S., Sep 1 2011, In : Bioanalysis. 3, 18, p. 2053-2056 4 p.

Research output: Contribution to journalReview article

4 Scopus citations

Gel-free mass spectrometry-based high throughput proteomics: Tools for studying biological response of proteins and proteomes

Roe, M. R. & Griffin, T. J., Sep 1 2006, In : Proteomics. 6, 17, p. 4678-4687 10 p.

Research output: Contribution to journalReview article

103 Scopus citations

Guanylyl cyclase structure, function and regulation

Potter, L. R., Dec 1 2011, In : Cellular Signalling. 23, 12, p. 1921-1926 6 p.

Research output: Contribution to journalReview article

138 Scopus citations

Hepatic fatty acid trafficking: Multiple forks in the road

Mashek, D. G., Jan 1 2013, In : Advances in Nutrition. 4, 6, p. 697-710 14 p.

Research output: Contribution to journalReview article

47 Scopus citations

Human hepatic stellate cell isolation and characterization

Shang, L., Hosseini, M., Liu, X., Kisseleva, T. & Brenner, D. A., Jan 1 2018, In : Journal of Gastroenterology. 53, 1, p. 6-17 12 p.

Research output: Contribution to journalReview article

Open Access
12 Scopus citations

Long-chain acyl-CoA synthetases and fatty acid channeling

Mashek, D. G., Li, L. O. & Coleman, R. A., Aug 1 2007, In : Future Lipidology. 2, 4, p. 465-476 12 p.

Research output: Contribution to journalReview article

120 Scopus citations

Mammalian triacylglycerol metabolism: Synthesis, lipolysis, and signaling

Coleman, R. A. & Mashek, D. G., Oct 12 2011, In : Chemical Reviews. 111, 10, p. 6359-6386 28 p.

Research output: Contribution to journalReview article

121 Scopus citations

MTOR regulation of autophagy

Jung, C. H., Ro, S. H., Cao, J., Otto, N. M. & Kim, D-H., Jan 1 2010, In : FEBS Letters. 584, 7, p. 1287-1295 9 p.

Research output: Contribution to journalReview article

1175 Scopus citations

Natriuretic peptide metabolism, clearance and degradation

Potter, L. R., Jun 1 2011, In : FEBS Journal. 278, 11, p. 1808-1817 10 p.

Research output: Contribution to journalReview article

173 Scopus citations

Natriuretic peptides, their receptors, and cyclic guanosine monophosphate-dependent signaling functions

Potter, L. R., Abbey-Hosch, S. & Dickey, D. M., Feb 1 2006, In : Endocrine reviews. 27, 1, p. 47-72 26 p.

Research output: Contribution to journalReview article

645 Scopus citations

Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing

Saito, M. A., Bertrand, E. M., Duffy, M. E., Gaylord, D. A., Held, N. A., Hervey, W. J., Hettich, R. L., Jagtap, P. D., Janech, M. G., Kinkade, D. B., Leary, D. H., McIlvin, M. R., Moore, E. K., Morris, R. M., Neely, B. A., Nunn, B. L., Saunders, J. K., Shepherd, A. I., Symmonds, N. I. & Walsh, D. A., Apr 5 2019, In : Journal of Proteome Research. 18, 4, p. 1461-1476 16 p.

Research output: Contribution to journalReview article

Open Access
3 Scopus citations

Reduction of hepatic glucose production as a therapeutic target in the treatment of diabetes

Wu, C., Okar, D. A., Kang, J. & Lange, A. J., Mar 1 2005, In : Current Drug Targets: Immune, Endocrine and Metabolic Disorders. 5, 1, p. 51-59 9 p.

Research output: Contribution to journalReview article

43 Scopus citations

Regulation and therapeutic targeting of peptide-activated receptor guanylyl cyclases

Potter, L. R., Apr 2011, In : Pharmacology and Therapeutics. 130, 1, p. 71-82 12 p.

Research output: Contribution to journalReview article

81 Scopus citations

Regulation of intraocular pressure by soluble and membrane guanylate cyclases and their role in glaucoma

Buys, E. S., Potter, L. R., Pasquale, L. R. & Ksander, B. R., May 19 2014, In : Frontiers in Molecular Neuroscience. 7, MAY, 38.

Research output: Contribution to journalReview article

23 Scopus citations

The role of lipid droplets in metabolic disease in rodents and humans

Greenberg, A. S., Coleman, R. A., Kraemer, F. B., McManaman, J. L., Obin, M. S., Puri, V., Yan, Q. W., Miyoshi, H. & Mashek, D. G., Jun 1 2011, In : Journal of Clinical Investigation. 121, 6, p. 2102-2110 9 p.

Research output: Contribution to journalReview article

338 Scopus citations

The role of the proteasome in AML

Csizmar, C. M., Kim, D. H. & Sachs, Z., Dec 2 2016, In : Blood cancer journal. 6, 12, p. e503

Research output: Contribution to journalReview article

Open Access
18 Scopus citations
Paper

A high-throughput information added proteomic strategy using free flow electrophoresis and tandem mass spectrometry

Xie, H., Bandhakavi, S., Rhodus, N., Griffin, R. J., Carlis, J. V. & Griffin, T. J., Dec 1 2005, p. 12473-12501. 29 p.

Research output: Contribution to conferencePaper

Letter
Open Access

Multi-omic data analysis using Galaxy

Boekel, J., Chilton, J. M., Cooke, I. R., Horvatovich, P. L., Jagtap, P. D., Käll, L., Lehtiö, J., Lukasse, P., Moerland, P. D. & Griffin, T. J., Feb 2015, In : Nature biotechnology. 33, 2, p. 137-139 3 p.

Research output: Contribution to journalLetter

58 Scopus citations

Prescription patterns of anti-diabetic medications and clinical outcomes in Asian patients with heart failure and diabetes mellitus

on behalf of the ASIAN-HF Investigators, May 2019, In : European Journal of Heart Failure. 21, 5, p. 685-688 4 p.

Research output: Contribution to journalLetter

2 Scopus citations

Sequence-specific 1H, 13C and 15N resonance assignments of the rat liver fructose-2,6-bisphosphatase domain [3]

Zangger, K., Pervushin, K., Sterk, H., Lange, A. J. & Okar, D. A., Nov 1 2003, In : Journal of biomolecular NMR. 27, 3, p. 281-282 2 p.

Research output: Contribution to journalLetter

2 Scopus citations
Editorial

Editorial introductions

Abumrad, N., Lange, A., Pichard, C., Meguid, M., D'Alessio, D. & Tappy, L., Jul 1 2006, In : Current opinion in clinical nutrition and metabolic care. 9, 4, p. VII-IX

Research output: Contribution to journalEditorial

Conference contribution

Generating GO slim using relational database management systems to support proteomics analysis

Onsongo, G., Xie, H., Griffin, T. J. & Carlis, J., Sep 22 2008, Proceedings of the 21st IEEE International Symposium on Computer-Based Medical Systems, CBMS 2008. p. 215-217 3 p. 4561989. (Proceedings - IEEE Symposium on Computer-Based Medical Systems).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Human saliva proteome: An overview

Griffin, T. J., Jan 1 2014, Sensing Technologies for Global Health, Military Medicine, and Environmental Monitoring IV. SPIE, 91120B. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 9112).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The human saliva proteome: Overview and emerging methods for characterization

Griffin, T. J., Jan 1 2015, Advances in Global Health Through Sensing Technologies 2015. Southern, S. O., Gartner, C., Stallings, J. D. & Rodriguez-Chavez, I. R. (eds.). SPIE, Vol. 9490. 949003

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The proteome of human saliva

Griffin, T. J., Aug 12 2013, Sensing Technologies for Global Health, Military Medicine, and Environmental Monitoring III. 87230A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8723).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Conference article
Comment/debate

Corrigendum: Persistent upregulation of the β-Tubulin tubb6, linked to muscle regeneration, is a source of microtubule disorganization in dystrophic muscle (Human Molecular Genetics (2019) 28:7 (1117-1135) DOI: 10.1093/hmg/ddy418)

Randazzo, D., Khalique, U., Belanto, J. J., Kenea, A., Talsness, D. M., Olthoff, J. T., Tran, M. D., Zaal, K. J., Pak, K., Pinal-Fernandez, I., Mammen, A. L., Sackett, D., Ervasti, J. M. & Ralston, E., Jun 1 2019, In : Human molecular genetics. 28, 11, 1 p.

Research output: Contribution to journalComment/debate

Open Access

Erratum: Statement of retraction (Diabetes (2012) 61 (3114-3125))

Zhang, W., Zhang, X., Wang, H., Guo, X., Li, H., Wang, Y., Xu, X., Tan, L., Mashek, M. T., Zhang, C., Chen, Y., Mashek, D. G., Foretz, M., Zhu, C., Zhou, H., Liu, X., Viollet, B., Wu, C. & Huo, Y., Mar 1 2013, In : Diabetes. 62, 3, 1 p.

Research output: Contribution to journalComment/debate

Serum TAG analysis differentiates between genetic and obesity-associated NAFLD

Mashek, D. G. & Greenberg, A. S., Jan 1 2014, In : Diabetes. 63, 1, p. 42-44 3 p.

Research output: Contribution to journalComment/debate

5 Scopus citations

The metabolism of cancer cells: Moonlighting proteins and growth control

Abumrad, N. A. & Lange, A. J., Jul 1 2006, In : Current opinion in clinical nutrition and metabolic care. 9, 4, p. 337-338 2 p.

Research output: Contribution to journalComment/debate

1 Scopus citations

The Underpinnings of PNPLA3-Mediated Fatty Liver Emerge

Shang, L. & Mashek, D. G., Jan 1 2020, In : Hepatology. 71, 1, p. 375-377 3 p.

Research output: Contribution to journalComment/debate

2 Scopus citations
Chapter

A coupled approach utilizing immunohistochemistry and immunocytochemistry to visualize cellular lipophagy

Sathyanarayan, A., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 185-191 7 p. (Methods in Molecular Biology; vol. 1554).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Actin Isoforms in Neuronal Development and Function

Cheever, T. R. & Ervasti, J. M., 2013, International Review of Cell and Molecular Biology. Elsevier Inc., p. 157-213 57 p. (International Review of Cell and Molecular Biology; vol. 301).

Research output: Chapter in Book/Report/Conference proceedingChapter

18 Scopus citations

Biology of the Striated Muscle Dystrophin-Glycoprotein Complex

Ervasti, J. M. & Sonnemann, K. J., Jan 1 2008, A Survey of Cell Biology. Academic Press Inc., p. 191-225 35 p. (International Review of Cytology; vol. 265).

Research output: Chapter in Book/Report/Conference proceedingChapter

102 Scopus citations

Carbonylated Proteins and Their Metabolic Regulation: Overview of Mechanisms, Target Proteins, and Characterization Using Proteomic Methods

Afiuni-Zadeh, S. & Griffin, T. J., Apr 20 2017, Protein Carbonylation: Principles, Analysis, and Biological Implications. Wiley, p. 110-130 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Chapter 13: Using Galaxy for Proteomics

Guerrero, C. R., Jagtap, P. D., Johnson, J. E. & Griffin, T. J., Jan 1 2017, Proteome Informatics. Bessant, C. & Gaskell, S. J. (eds.). 5 ed. Royal Society of Chemistry, p. 289-320 32 p. (New Developments in Mass Spectrometry; vol. 2017-January, no. 5).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Comparative Metaproteomics to Study Environmental Changes

Matallana-Surget, S., Jagtap, P. D., Griffin, T. J., Beraud, M. & Wattiez, R., Jan 1 2018, Metagenomics: Perspectives, Methods, and Applications. Elsevier Inc., p. 327-363 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations