Research Output 1970 2020

4 Citations (Scopus)

Dephosphorylation of the NPR2 guanylyl cyclase contributes to inhibition of bone growth by fibroblast growth factor

Shuhaibar, L. C., Robinson, J. W., Vigone, G., Shuhaibar, N. P., Egbert, J. R., Baena, V., Uliasz, T. F., Kaback, D., Yee, S. P., Feil, R., Fisher, M. C., Dealy, C. N., Potter, L. R. & Jaffe, L. A., Dec 4 2017, In : eLife. 6, e31343.

Research output: Contribution to journalArticle

Open Access
Fibroblast Growth Factors
Guanylate Cyclase
Bone Development
Cyclic GMP
Bone
25 Citations (Scopus)

Dephosphorylation of juxtamembrane serines and threonines of the NPR2 guanylyl cyclase is required for rapid resumption of oocyte meiosis in response to luteinizing hormone

Shuhaibar, L. C., Egbert, J. R., Edmund, A. B., Uliasz, T. F., Dickey, D. M., Yee, S. P., Potter, L. R. & Jaffe, L. A., Jan 1 2016, In : Developmental Biology. 409, 1, p. 194-201 8 p.

Research output: Contribution to journalArticle

Natriuretic Peptides
Peptide Receptors
Guanylate Cyclase
Meiosis
Threonine
47 Citations (Scopus)

Dephosphorylation and inactivation of NPR2 guanylyl cyclase in granulosa cells contributes to the LH-induced decrease in cGMP that causes resumption of meiosis in rat oocytes

Egbert, J. R., Shuhaibar, L. C., Edmund, A. B., Van Helden, D. A., Robinson, J. W., Uliasz, T. F., Baena, V., Geerts, A., Wunder, F., Potter, L. R. & Jaffe, L. A., Sep 2014, In : Development (Cambridge). 141, 18, p. 3594-3604 11 p.

Research output: Contribution to journalArticle

Natriuretic Peptides
Peptide Receptors
Granulosa Cells
Guanylate Cyclase
Meiosis
47 Citations (Scopus)
Natriuretic Peptides
Brain Natriuretic Peptide
Atrial Natriuretic Factor
Neprilysin
Guanylate Cyclase
44 Citations (Scopus)

Delayed embryonic development and impaired cell growth and survival in Actg1 null mice

Bunnell, T. M. & Ervasti, J. M., Sep 1 2010, In : Cytoskeleton. 67, 9, p. 564-572 9 p.

Research output: Contribution to journalArticle

Embryonic Development
Actins
Cell Survival
Growth
Growth Disorders
52 Citations (Scopus)

Deep metaproteomic analysis of human salivary supernatant

Jagtap, P. D., Mcgowan, T., Bandhakavi, S., Tu, Z. J., Seymour, S., Griffin, T. J. & Rudney, J. D., Apr 1 2012, In : Proteomics. 12, 7, p. 992-1001 10 p.

Research output: Contribution to journalArticle

Proteome
Peptides
Proteins
Mouth Diseases
Selenomonas

Data Independent Acquisition in Practice: Foundations and Resources for Implementing DIA

Neely, B., Kirkpatrick, J., Midha, M., Stemmer, P., Martin, L. R., Wang, Y., Herring, L., Phinney, B., Shan, B., Chien, A. & Jagtap, P., Dec 1 2019, In : Journal of biomolecular techniques : JBT. 30, p. S46

Research output: Contribution to journalArticle

Proteomics
Research
Education
Workflow
Research Personnel
16 Citations (Scopus)

Cyclobutane quisqualic acid analogues as selective mGluR5a metabotropic glutamic acid receptor ligands

Littman, L., Tokar, C., Venkatraman, S., Roon, R. J., Koerner, J. F., Robinson, M. B. & Johnson, R. L., May 6 1999, In : Journal of Medicinal Chemistry. 42, 9, p. 1639-1647 9 p.

Research output: Contribution to journalArticle

Cyclobutanes
Quisqualic Acid
Glutamic Acid
Phosphatidylinositols
Ligands
40 Citations (Scopus)

Cyclic AMP controls mTOR through regulation of the dynamic interaction between Rheb and phosphodiesterase 4D

Kim, H. W., Ha, S. H., Lee, M. N., Huston, E., Kim, D. H., Jang, S. K., Suh, P. G., Houslay, M. D. & Ryu, S. H., Nov 1 2010, In : Molecular and cellular biology. 30, 22, p. 5406-5420 15 p.

Research output: Contribution to journalArticle

Type 4 Cyclic Nucleotide Phosphodiesterase
Cyclic AMP
Second Messenger Systems
Transducers
mechanistic target of rapamycin complex 1
39 Citations (Scopus)

Crystal structure of the Gtr1pGTP-Gtr2pGDP protein complex reveals large structural rearrangements triggered by GTP-to-GDP conversion

Jeong, J. H., Lee, K. H., Kim, Y-M., Kim, D-H., Oh, B. H. & Kim, Y. G., Aug 24 2012, In : Journal of Biological Chemistry. 287, 35, p. 29648-29653 6 p.

Research output: Contribution to journalArticle

GTP Phosphohydrolases
Raptors
Guanosine Triphosphate
Crystal structure
Proteins
5 Citations (Scopus)

Creatine kinase B is necessary to limit myoblast fusion during myogenesis

Simionescu-Bankston, A., Pichavant, C., Canner, J. P., Apponi, L. H., Wang, Y., Steeds, C., Olthoff, J. T., Belanto, J. J., Ervasti, J. M. & Pavlath, G. K., Jun 1 2015, In : American Journal of Physiology - Cell Physiology. 308, 11, p. C919-C931

Research output: Contribution to journalArticle

Muscle Development
Myoblasts
Creatine Kinase
Skeletal Muscle Fibers
Actins

Corrigendum: Persistent upregulation of the β-Tubulin tubb6, linked to muscle regeneration, is a source of microtubule disorganization in dystrophic muscle (Human Molecular Genetics (2019) 28:7 (1117-1135) DOI: 10.1093/hmg/ddy418)

Randazzo, D., Khalique, U., Belanto, J. J., Kenea, A., Talsness, D. M., Olthoff, J. T., Tran, M. D., Zaal, K. J., Pak, K., Pinal-Fernandez, I., Mammen, A. L., Sackett, D., Ervasti, J. M. & Ralston, E., Jun 1 2019, In : Human molecular genetics. 28, 11, 1 p.

Research output: Contribution to journalComment/debate

Open Access
Medical Genetics
Tubulin
Microtubules
Regeneration
Molecular Biology
9 Citations (Scopus)

"Corination" of the proANP converting enzyme

Potter, L. R., Feb 1 2005, In : Cell Metabolism. 1, 2, p. 88-90 3 p.

Research output: Contribution to journalShort survey

Atrial Natriuretic Factor
Natriuretic Peptides
Cardiomegaly
Enzymes
Peptide Hydrolases
19 Citations (Scopus)
Phosphofructokinase-2
Fructose-Bisphosphatase
Glucokinase
Glycolysis
Hepatocytes
5 Citations (Scopus)

Contribution of conserved amino acids at the dimeric interface to the conformational stability and the structural integrity of the active site in ketosteroid isomerase from Pseudomonas putida biotype B

Nam, G. H., Kim, D. H., Ha, N. C., Jang, D. S., Yun, Y. S., Hong, B. H., Oh, B. H. & Choi, K. Y., Jul 1 2003, In : Journal of Biochemistry. 134, 1, p. 101-110 10 p.

Research output: Contribution to journalArticle

Ketosteroids
Isomerases
Pseudomonas putida
Structural integrity
Catalytic Domain
25 Citations (Scopus)

Context-dependent functional substitution of α-skeletal actin by γ-cytoplasmic actin

Jaeger, M. A., Sonnemann, K. J., Fitzsimons, D. P., Prins, K. W. & Ervasti, J. M., Jul 1 2009, In : FASEB Journal. 23, 7, p. 2205-2214 10 p.

Research output: Contribution to journalArticle

Actins
Substitution reactions
Muscle
Muscles
Transgenic Mice
23 Citations (Scopus)

Congenital diaphragmatic hernias: From genes to mechanisms to therapies

Kardon, G., Ackerman, K. G., McCulley, D. J., Shen, Y., Wynn, J., Shang, L., Bogenschutz, E., Sun, X. & Chung, W. K., Aug 1 2017, In : DMM Disease Models and Mechanisms. 10, 8, p. 955-970 16 p.

Research output: Contribution to journalReview article

Open Access
Genes
Diaphragms
Lung
Defects
Diaphragm
71 Citations (Scopus)

Compound loss of muscleblind-like function in myotonic dystrophy

Lee, K. Y., Li, M., Manchanda, M., Batra, R., Charizanis, K., Mohan, A., Warren, S. A., Chamberlain, C. M., Finn, D., Hong, H., Ashraf, H., Kasahara, H., Ranum, L. P. W. & Swanson, M. S., Dec 2013, In : EMBO Molecular Medicine. 5, 12, p. 1887-1900 14 p.

Research output: Contribution to journalArticle

Myotonic Dystrophy
RNA
Skeletal Muscle
Myocardium
Myotonia
Clostridium
Ethanol
Genes
Protein folding
Bacteria
2 Citations (Scopus)

Comparative Metaproteomics to Study Environmental Changes

Matallana-Surget, S., Jagtap, P. D., Griffin, T. J., Beraud, M. & Wattiez, R., Jan 1 2018, Metagenomics: Perspectives, Methods, and Applications. Elsevier Inc., p. 327-363 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Aquatic ecosystems
Microorganisms
Ecosystems
Ecosystem
Workflow
1 Citation (Scopus)

Community-Driven Data Analysis Training for Biology

Galaxy Training Network, Jun 27 2018, In : Cell Systems. 6, 6, p. 752-758.e1

Research output: Contribution to journalArticle

Open Access
Biological Science Disciplines
Web Browser
Research Personnel
Explosions
Internet
11 Citations (Scopus)

CNP, cardiac natriuretic peptide?

Potter, L. R., May 1 2004, In : Endocrinology. 145, 5, p. 2129-2130 2 p.

Research output: Contribution to journalShort survey

C-Type Natriuretic Peptide
Natriuretic Peptides
29 Citations (Scopus)

Cloning, expression and chromosomal localization of a human testis 6- phosphofructo-2-kinase/fructose-2,6-bisphosphatase gene

Manzano, A., Pérez, J. X., Nadal, M., Estivill, X., Lange, A. J. & Bartrons, R., Mar 18 1999, In : Gene. 229, 1-2, p. 83-89 7 p.

Research output: Contribution to journalArticle

Testis
Organism Cloning
Isoenzymes
Genes
Complementary DNA
1 Citation (Scopus)

Chronic Obstructive Pulmonary Disease Phenotype Dictates Cancer-Promoting Stromal Gene Expression Programs

Wendt, C. H., Sandri, B. J., Masvidal, L., Murie, C., Bartish, M., Avdulov, S. V., Higgins, L., Markowski, T., Peterson, M., Bergh, J., Yang, P., Rolny, C., Limper, A. H., Griffin, T. J., Bitterman, P. B. & Larsson, O., Dec 1 2018, In : Annals of the American Thoracic Society. 15, 4, p. S290-S291

Research output: Contribution to journalArticle

Chronic Obstructive Pulmonary Disease
Phenotype
Gene Expression
Neoplasms
Lung Neoplasms
18 Citations (Scopus)

Characterizing cardiac molecular mechanisms of mammalian hibernation via quantitative proteogenomics

Vermillion, K. L., Jagtap, P. D., Johnson, J. E., Griffin, T. J. & Andrews, M. T., Nov 6 2015, In : Journal of Proteome Research. 14, 11, p. 4792-4804 13 p.

Research output: Contribution to journalArticle

Hibernation
Galaxies
Sciuridae
Proteomics
Proteins
50 Citations (Scopus)

Characterization of two forms of asparaginase in Saccharomyces cerevisiae

Dunlop, P. C., Meyer, G. M., Ban, D. & Roon, R. J., Jan 1 1978, In : Journal of Biological Chemistry. 253, 4, p. 1297-1304 8 p.

Research output: Contribution to journalArticle

Asparaginase
Substrate Specificity
Thermodynamics
Yeast
Isoenzymes
43 Citations (Scopus)

Characterization of a Novel Ser-cisSer-Lys Catalytic Triad in Comparison with the Classical Ser-His-Asp Triad

Shin, S., Yun, Y. S., Koo, H. M., Kim, Y. S., Choi, K. Y. & Oh, B. H., Jul 4 2003, In : Journal of Biological Chemistry. 278, 27, p. 24937-24943 7 p.

Research output: Contribution to journalArticle

amidase
Alanine
Cysteine
Substitution reactions
Sulfinic Acids
6 Citations (Scopus)

Characterization of an intronic hormone response element of the rat liver/skeletal muscle 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase gene

McFarlan, S. C., Zhang, Q., Miksicek, R. J. & Lange, A. J., Jul 17 1997, In : Molecular and Cellular Endocrinology. 129, 2, p. 219-227 9 p.

Research output: Contribution to journalArticle

Phosphofructokinase-2
Response Elements
Liver
Muscle
Rats
13 Citations (Scopus)

Characterization of a Dio-9-resistant strain of Saccharomyces cerevisiae

Roon, R. J., Larimore, F. S., Meyer, G. M. & Kreisle, R. A., Jan 15 1978, In : Archives of Biochemistry and Biophysics. 185, 1, p. 142-150 9 p.

Research output: Contribution to journalArticle

Yeast
Saccharomyces cerevisiae
Adenosine Triphosphatases
Protons
Yeasts
1 Citation (Scopus)

Chapter 13: Using Galaxy for Proteomics

Guerrero, C. R., Jagtap, P. D., Johnson, J. E. & Griffin, T. J., Jan 1 2017, Proteome Informatics. Bessant, C. & Gaskell, S. J. (eds.). 5 ed. Royal Society of Chemistry, p. 289-320 32 p. (New Developments in Mass Spectrometry; vol. 2017-January, no. 5).

Research output: Chapter in Book/Report/Conference proceedingChapter

Galaxies
Mass spectrometry
Bioinformatics
Proteomics
Scalability

Challenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring Hits

Hubler, S. L., Kumar, P., Mehta, S., Easterly, C., Johnson, J. E., Jagtap, P. D. & Griffin, T. J., Jan 3 2020, In : Journal of Proteome Research. 19, 1, p. 161-173 13 p.

Research output: Contribution to journalArticle

Peptides
Workflow
Databases
Proteomics
Liquid chromatography
15 Citations (Scopus)

Cell biology assessment of glucokinase mutations V62M and G72R in pancreatic β-cells: Evidence for cellular instability of catalytic activity

Arden, C., Trainer, A., De La Iglesia, N., Scougall, K. T., Gloyn, A. L., Lange, A. J., Shaw, J. A. M., Matschinsky, F. M. & Agius, L., Jul 1 2007, In : Diabetes. 56, 7, p. 1773-1782 10 p.

Research output: Contribution to journalArticle

Glucokinase
Cell Biology
Mutation
Green Fluorescent Proteins
Phosphofructokinase-2
8 Citations (Scopus)

Catalytically active guanylyl cyclase B requires endoplasmic reticulum-mediated glycosylation, and mutations that inhibit this process cause dwarfism

Dickey, D. M., Edmund, A. B., Otto, N. M., Chaffee, T. S., Robinson, J. W. & Potter, L. R., May 20 2016, In : Journal of Biological Chemistry. 291, 21, p. 11385-11393 9 p.

Research output: Contribution to journalArticle

Glycosylation
Dwarfism
Guanylate Cyclase
Endoplasmic Reticulum
C-Type Natriuretic Peptide
25 Citations (Scopus)

Cardiac phosphatase-deficient 6-phosphofructo-2-kinase/fructose-2,6- bisphosphatase increases glycolysis, hypertrophy, and myocyte resistance to hypoxia

Wang, Q., Donthi, R. V., Wang, J., Lange, A. J., Watson, L. J., Jones, S. P. & Epstein, P. N., Jun 1 2008, In : American Journal of Physiology - Heart and Circulatory Physiology. 294, 6, p. H2889-H2897

Research output: Contribution to journalArticle

Phosphofructokinase-2
Glycolysis
Phosphoric Monoester Hydrolases
Muscle Cells
Hypertrophy
172 Citations (Scopus)
Protein Carbonylation
Carbonylation
Fatty Acid-Binding Proteins
Adipocytes
Insulin Resistance

Carbonylated Proteins and Their Metabolic Regulation: Overview of Mechanisms, Target Proteins, and Characterization Using Proteomic Methods

Afiuni-Zadeh, S. & Griffin, T. J., Apr 20 2017, Protein Carbonylation: Principles, Analysis, and Biological Implications. Wiley, p. 110-130 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Carbonylation
Proteins
Oxidative stress
Avidin
Biomarkers
1 Citation (Scopus)

Caloric restriction prevents carcinogen-initiated liver tumorigenesis in mice

Ploeger, J. M., Manivel, J. C., Boatner, L. N. & Mashek, D. G., Nov 2017, In : Cancer Prevention Research. 10, 11, p. 660-670 11 p.

Research output: Contribution to journalArticle

Caloric Restriction
Carcinogens
Carcinogenesis
Liver
Diet
29 Citations (Scopus)

Calcium-dependent dephosphorylation mediates the hyperosmotic and lysophosphatidic acid-dependent inhibition of natriuretic peptide receptor-B/guanylyl cyclase-B

Potthast, R., Abbey-Hosch, S. E., Antos, L. K., Marchant, J. S., Kuhn, M. & Potter, L. R., Nov 19 2004, In : Journal of Biological Chemistry. 279, 47, p. 48513-48519 7 p.

Research output: Contribution to journalArticle

Guanylate Cyclase
Calcium
Phosphorylation
C-Type Natriuretic Peptide
Glutamates
16 Citations (Scopus)
Open Access
Idiopathic Pulmonary Fibrosis
Calcium-Binding Proteins
Mesenchymal Stromal Cells
Fibrosis
Myofibroblasts
5 Citations (Scopus)
Open Access
Adult Respiratory Distress Syndrome
Bronchoalveolar Lavage Fluid
Survivors
Proteins
Oxidative Stress
53 Citations (Scopus)

Bromoperoxidase activity of vanadate-substituted acid phosphatases from Shigella flexneri and Salmonella enterica ser. typhimurium

Tanaka, N., Dumay, V., Liao, Q., Lange, A. J. & Wever, R., May 6 2002, In : European Journal of Biochemistry. 269, 8, p. 2162-2167 6 p.

Research output: Contribution to journalArticle

Shigella flexneri
Salmonella
Salmonella enterica
Vanadates
Acid Phosphatase
5 Citations (Scopus)
Proteome
Chromosomes
Galaxies
Proteins
Workflow
43 Citations (Scopus)

Breaking fat: The regulation and mechanisms of lipophagy

Schulze, R. J., Sathyanarayan, A. & Mashek, D. G., Oct 2017, In : Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1862, 10, p. 1178-1187 10 p.

Research output: Contribution to journalReview article

Open Access
Fats
Research
Metabolic Diseases
Liver
Lipid Droplets
5 Citations (Scopus)

BRASSINOSTEROID-SIGNALING KINASE 3, a plasma membrane-associated scaffold protein involved in early brassinosteroid signaling

Ren, H., Willige, B. C., Jaillais, Y., Geng, S., Park, M., Gray, W. M. & Chory, J., Jan 1 2019, In : PLoS genetics. 15, 1, e1007904.

Research output: Contribution to journalArticle

Open Access
Brassinosteroids
scaffolding proteins
brassinosteroids
Blood Proteins
Membrane Proteins
101 Citations (Scopus)

Biology of the Striated Muscle Dystrophin-Glycoprotein Complex

Ervasti, J. M. & Sonnemann, K. J., Jan 1 2008, A Survey of Cell Biology. Academic Press Inc., p. 191-225 35 p. (International Review of Cytology; vol. 265).

Research output: Chapter in Book/Report/Conference proceedingChapter

Dystrophin
Striated Muscle
Glycoproteins
Muscular Dystrophies
Muscle Cells
33 Citations (Scopus)

Biodesign of a renal-protective peptide based on alternative splicing of B-type natriuretic peptide

Pan, S., Chen, H. H., Dickey, D. M., Boerrigter, G., Lee, C., Kleppe, L. S., Hall, J. L., Lerman, A., Redfield, M. M., Potter, L. R., Burnett, J. C. & Simari, R. D., Jul 7 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 27, p. 11282-11287 6 p.

Research output: Contribution to journalArticle

Brain Natriuretic Peptide
Alternative Splicing
Kidney
Peptides
Glomerular Filtration Rate
Open Access
Dimercaprol
Respiratory Insufficiency
Fluids
35 Citations (Scopus)

Axonal regeneration and neuronal function are preserved in motor neurons lacking ß-actin In Vivo

Cheever, T. R., Olson, E. A. & Ervasti, J. M., Mar 28 2011, In : PloS one. 6, 3, e17768.

Research output: Contribution to journalArticle

Motor Neurons
motor neurons
Neurons
actin
Actins
97 Citations (Scopus)

A two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies

Jagtap, P., Goslinga, J., Kooren, J. A., Mcgowan, T., Wroblewski, M. S., Seymour, S. L. & Griffin, T. J., Apr 1 2013, In : Proteomics. 13, 8, p. 1352-1357 6 p.

Research output: Contribution to journalArticle

Databases
Peptides
Proteogenomics
Proteomics
Proteins
9 Citations (Scopus)
Staurosporine
Guanylate Cyclase
Guanosine Triphosphate
Adenosine Triphosphate
Guanylate Cyclase-Coupled Receptors