Research Output 1965 2019

2019

Accelerated imaging with segmented 2D pulses using parallel imaging and virtual coils

Mullen, M., Gutierrez, A., Kobayashi, N., Haupt, J. D. & Garwood, M., Aug 1 2019, In : Journal of Magnetic Resonance. 305, p. 185-194 10 p.

Research output: Contribution to journalArticle

coils
Imaging techniques
Magnetic Fields
pulses
bandwidth

Accelerated Simultaneous Multi-Slice MRI using Subject-Specific Convolutional Neural Networks

Zhang, C., Moeller, S., Weingartner, S., Ugurbil, K. & Akcakaya, M., Feb 19 2019, Conference Record of the 52nd Asilomar Conference on Signals, Systems and Computers, ACSSC 2018. Matthews, M. B. (ed.). IEEE Computer Society, p. 1636-1640 5 p. 8645313. (Conference Record - Asilomar Conference on Signals, Systems and Computers; vol. 2018-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic resonance
Neural networks
Imaging techniques
Interpolation
Calibration

Accuracy and Reliability of Root Crack and Fracture Detection in Teeth Using Magnetic Resonance Imaging

Schuurmans, T. J., Nixdorf, D. R., Idiyatullin, D. S., Law, A. S., Barsness, B. D., Roach, S. H. & Gaalaas, L., Jun 1 2019, In : Journal of Endodontics. 45, 6, p. 750-755.e2

Research output: Contribution to journalArticle

Tooth
Magnetic Resonance Imaging
Tooth Fractures
Confidence Intervals
Artifacts
1 Citation (Scopus)
Image-Guided Biopsy
Magnetic Resonance Imaging
Biopsy
Ultrasonography
Decision Support Techniques
3 Citations (Scopus)

A critical assessment of data quality and venous effects in sub-millimeter fMRI

Kay, K. N., Jamison, K. W., Vizioli, L., Zhang, R., Margalit, E. & Ugurbil, K., Apr 1 2019, In : NeuroImage. 189, p. 847-869 23 p.

Research output: Contribution to journalArticle

Magnetic Resonance Imaging
Signal-To-Noise Ratio
Visual Cortex
Neurosciences
Data Accuracy
4 Citations (Scopus)

Advances in computational and statistical diffusion MRI

O'Donnell, L. J., Daducci, A., Wassermann, D. & Lenglet, C., Jan 1 2019, In : NMR in biomedicine. 32, 4, e3805.

Research output: Contribution to journalReview article

Open Access
Diffusion Magnetic Resonance Imaging
Magnetic resonance
Imaging techniques
Brain
Computational methods
3 Citations (Scopus)

Airway morphology and inspiratory flow features in the early stages of Chronic Obstructive Pulmonary Disease

Van de Moortele, T., Goerke, U., Wendt, C. H. & Coletti, F., Jun 1 2019, In : Clinical Biomechanics. 66, p. 60-65 6 p.

Research output: Contribution to journalArticle

Chronic Obstructive Pulmonary Disease
Lung
Disease Progression
Biomarkers
Respiratory Mechanics

Altered Structural Connection between Hippocampus and Insula in Adolescent Major Depressive Disorder using DTI

Chu, S. H., Lenglet, C., Schreiner, M. W., Klimes-Dougan, B., Cullen, K. R. & Parhi, K. K., Feb 19 2019, Conference Record of the 52nd Asilomar Conference on Signals, Systems and Computers, ACSSC 2018. Matthews, M. B. (ed.). IEEE Computer Society, p. 1182-1186 5 p. 8645183. (Conference Record - Asilomar Conference on Signals, Systems and Computers; vol. 2018-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Diffusion tensor imaging
Anisotropy
Psychiatry
6 Citations (Scopus)
Deep Brain Stimulation
Cadaver
Artifacts
Temperature
Patient Safety
1 Citation (Scopus)

Autocalibrated multiband CAIPIRINHA with through-time encoding: Proof of principle and application to cardiac tissue phase mapping

Ferrazzi, G., Bassenge, J. P., Wink, C., Ruh, A., Markl, M., Moeller, S., Metzger, G., Ittermann, B. & Schmitter, S., Feb 1 2019, In : Magnetic resonance in medicine. 81, 2, p. 1016-1030 15 p.

Research output: Contribution to journalArticle

Myocardium
Workflow
Calibration
Pulse

Automated gradient-based electrical properties tomography in the human brain using 7 Tesla MRI

Wang, Y., Van de Moortele, P-F. & He, B., Nov 1 2019, In : Magnetic Resonance Imaging. 63, p. 258-266 9 p.

Research output: Contribution to journalArticle

Magnetic resonance imaging
Tomography
Brain
Electric properties
Seeds
1 Citation (Scopus)

Automatic localization of the subthalamic nucleus on patient-specific clinical MRI by incorporating 7 T MRI and machine learning: Application in deep brain stimulation

Kim, J., Duchin, Y., Shamir, R. R., Patriat, R., Vitek, J. L., Harel, N. & Sapiro, G., Feb 1 2019, In : Human Brain Mapping. 40, 2, p. 679-698 20 p.

Research output: Contribution to journalArticle

Subthalamic Nucleus
Deep Brain Stimulation
Microelectrodes
Post and Core Technique
Databases

Brain annotation toolbox: Exploring the functional and genetic associations of neuroimaging results

Liu, Z., Rolls, E. T., Liu, Z., Zhang, K., Yang, M., Du, J., Gong, W., Cheng, W., Dai, F., Wang, H., Ugurbil, K., Zhang, J. & Feng, J., Oct 1 2019, In : Bioinformatics. 35, 19, p. 3771-3778 8 p.

Research output: Contribution to journalArticle

Neuroimaging
Genetic Association
Annotation
Brain
Atlases
1 Citation (Scopus)
Neuroimaging
Brain
Noise
Magnetic Fields
Industry

Classifying Adolescent Major Depressive Disorder using Linear SVM with Anatomical Features from Diffusion Weighted Imaging

Chu, S. H., Lenglet, C., Schreiner, M. W., Klimes-Dougan, B., Cullen, K. R. & Parhi, K. K., Feb 19 2019, Conference Record of the 52nd Asilomar Conference on Signals, Systems and Computers, ACSSC 2018. Matthews, M. B. (ed.). IEEE Computer Society, p. 1197-1201 5 p. 8645542. (Conference Record - Asilomar Conference on Signals, Systems and Computers; vol. 2018-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain
Classifiers
Imaging techniques
Diffusion tensor imaging
Statistical tests
1 Citation (Scopus)

Compressed sensing reconstruction of 7 Tesla 23Na multi-channel breast data using 1H MRI constraint

Lachner, S., Zaric, O., Utzschneider, M., Minarikova, L., Zbyn, S., Hensel, B., Trattnig, S., Uder, M. & Nagel, A. M., Jul 1 2019, In : Magnetic Resonance Imaging. 60, p. 145-156 12 p.

Research output: Contribution to journalArticle

Compressed sensing
Magnetic resonance imaging
Image quality
Breast
Magnetic resonance

Computer-Vision Techniques for Water-Fat Separation in Ultra High-Field MRI Local Specific Absorption Rate Estimation

Torrado-Carvajal, A., Eryaman, Y., Turk, E. A., Herraiz, J. L., Hernandez-Tamames, J. A., Adalsteinsson, E., Wald, L. L. & Malpica, N., Mar 1 2019, In : IEEE Transactions on Biomedical Engineering. 66, 3, p. 768-774 7 p., 8411472.

Research output: Contribution to journalArticle

Oils and fats
Magnetic resonance imaging
Computer vision
Water
Labels
1 Citation (Scopus)
Open Access
Tomography
Electric properties
Magnetic resonance imaging
Electric Conductivity
Direction compound
resilience
sweep frequency
inhomogeneity
Weights and Measures
Processing
2 Citations (Scopus)

Cystathionine as a marker for 1p/19q codeleted gliomas by in vivo magnetic resonance spectroscopy

Branzoli, F., Pontoizeau, C., Tchara, L., Di Stefano, A. L., Kamoun, A., Deelchand, D. K., Valabrègue, R., Lehericy, S., Sanson, M., Ottolenghi, C. & Marjańska, M., Jun 10 2019, In : Neuro-Oncology. 21, 6, p. 765-774 10 p.

Research output: Contribution to journalArticle

Cystathionine
Glioma
Magnetic Resonance Spectroscopy
Phosphoglycerate Dehydrogenase
Liquid Chromatography
Biopsy
Information Systems
Image-Guided Biopsy
Prostate
Neoplasms
Neurochemistry
Alzheimer Disease
Magnetic Resonance Spectroscopy
Gyrus Cinguli
Inositol

Eliminating susceptibility induced hyperintensities in T1w MPRAGE brain images at 7 T

Ma, R., Henry, T. R. & Van de Moortele, P-F., Nov 1 2019, In : Magnetic Resonance Imaging. 63, p. 274-279 6 p.

Research output: Contribution to journalArticle

Brain
Temporal Lobe
Artifacts
Frontal Lobe
Air

Evolution of UHF Body Imaging in the Human Torso at 7T: Technology, Applications, and Future Directions

Erturk, M. A., Li, X., Van de Moortele, P-F., Ugurbil, K. & Metzger, G. J., Jun 1 2019, In : Topics in Magnetic Resonance Imaging. 28, 3, p. 101-124 24 p.

Research output: Contribution to journalReview article

Torso
Magnetic Resonance Imaging
Technology
Feasibility Studies
Magnetic Fields

Excitation and RF field control of a human-size 10.5-T MRI system

Bluem, P., Van de Moortele, P-F., Adriany, G. & Popovic, Z., Mar 1 2019, In : IEEE Transactions on Microwave Theory and Techniques. 67, 3, p. 1184-1196 13 p., 8576556.

Research output: Contribution to journalArticle

Magnetic resonance imaging
homogeneity
Imaging techniques
Magnetic resonance
excitation

Fast in vivo high-resolution diffusion MRI of the human cervical spinal cord microstructure

Labounek, R., Valošek, J., Zimolka, J., Piskořová, Z., Horák, T., Svátková, A., Bednařík, P., Hok, P., Vojtíšek, L., Hluštík, P., Bednařík, J. & Lenglet, C., Jan 1 2019, In : IFMBE Proceedings. 68, 1, p. 3-7 5 p.

Research output: Contribution to journalConference article

Magnetic resonance imaging
Microstructure
Imaging techniques
Diffusion tensor imaging
Neurology

Fragmented ambiguous objects: Stimuli with stable low-level features for object recognition tasks

Olman, C. A., Espensen-Sturges, T., Muscanto, I., Longenecker, J. M., Burton, P. C., Grant, A. N. & Sponheim, S. R., Apr 1 2019, In : PloS one. 14, 4, e0215306.

Research output: Contribution to journalArticle

Open Access
Object recognition
Semantics
Luminance
Brain
Databases

Functional magnetic resonance imaging and oculomotor dysfunction in mild traumatic brain injury

Rockswold, S. B., Burton, P. C., Chang, A., McNally, N., Grant, A. N., Rockswold, G. L., Low, W. C., Eberly, L. E., Yacoub, E. & Lenglet, C., Apr 1 2019, In : Journal of Neurotrauma. 36, 7, p. 1099-1105 7 p.

Research output: Contribution to journalArticle

Open Access
Brain Concussion
Magnetic Resonance Imaging
Occipital Lobe
Control Groups
Brain
Corpus Callosum
Axons
Myelin Sheath
Neuroimaging
Histology
2 Citations (Scopus)
Open Access
Connectome
Magnetic Resonance Imaging
Brain
Noise
Seeds
1 Citation (Scopus)

Imaging of a high concentration of iron labeled cells with positive contrast in a rat knee

Magnitsky, S., Pickup, S., Garwood, M. & Idiyatullin, D. S., Mar 1 2019, In : Magnetic resonance in medicine. 81, 3, p. 1947-1954 8 p.

Research output: Contribution to journalArticle

Open Access
Knee
Iron
Protons
Suspensions
Fats

In vivo 1H MRS detection of cystathionine in human brain tumors

Branzoli, F., Deelchand, D. K., Sanson, M., Lehéricy, S. & Marjanska, M., Oct 1 2019, In : Magnetic resonance in medicine. 82, 4, p. 1259-1265 7 p.

Research output: Contribution to journalArticle

Cystathionine
Brain Neoplasms
Glioma
Isocitrate Dehydrogenase
Proton Magnetic Resonance Spectroscopy
1 Citation (Scopus)
Open Access
Tomography
Neoplasms
Heterografts
Rodentia
Nude Rats
5 Citations (Scopus)

Methodological consensus on clinical proton MRS of the brain: Review and recommendations

Wilson, M., Andronesi, O., Barker, P. B., Bartha, R., Bizzi, A., Bolan, P. J., Brindle, K. M., Choi, I. Y., Cudalbu, C., Dydak, U., Emir, U. E., Gonzalez, R. G., Gruber, S., Gruetter, R., Gupta, R. K., Heerschap, A., Henning, A., Hetherington, H. P., Huppi, P. S., Hurd, R. E. & 29 others, Kantarci, K., Kauppinen, R. A., Klomp, D. W. J., Kreis, R., Kruiskamp, M. J., Leach, M. O., Lin, A. P., Luijten, P. R., Marjanska, M., Maudsley, A. A., Meyerhoff, D. J., Mountford, C. E., Mullins, P. G., Murdoch, J. B., Nelson, S. J., Noeske, R., Oz, G., Pan, J. W., Peet, A. C., Poptani, H., Posse, S., Ratai, E. M., Salibi, N., Scheenen, T. W. J., Smith, I. C. P., Soher, B. J., Tkáč, I., Vigneron, D. B. & Howe, F. A., Aug 1 2019, In : Magnetic resonance in medicine. 82, 2, p. 527-550 24 p.

Research output: Contribution to journalReview article

Open Access
Protons
Brain
Brain Diseases
Magnetic Fields
Research
3 Citations (Scopus)

Microelectrode Recordings Validate the Clinical Visualization of Subthalamic-Nucleus Based on 7T Magnetic Resonance Imaging and Machine Learning for Deep Brain Stimulation Surgery

Shamir, R. R., Duchin, Y., Kim, J., Patriat, R., Marmor, O., Bergman, H., Vitek, J. L., Sapiro, G., Bick, A., Eliahou, R., Eitan, R., Israel, Z. & Harel, N., Mar 1 2019, In : Clinical Neurosurgery. 84, 3, p. 749-756 8 p.

Research output: Contribution to journalArticle

Subthalamic Nucleus
Deep Brain Stimulation
Microelectrodes
Magnetic Resonance Imaging
Parkinson Disease
2 Citations (Scopus)

MRI vs CT-based 2D-3D auto-registration accuracy for quantifying shoulder motion using biplane video-radiography

Akbari-Shandiz, M., Lawrence, R. L., Ellingson, A. M., Johnson, C. P., Zhao, K. D. & Ludewig, P. M., Jan 3 2019, In : Journal of Biomechanics. 82, p. 375-380 6 p.

Research output: Contribution to journalArticle

Open Access
Radiography
Magnetic resonance
Tomography
Magnetic Resonance Imaging
Imaging techniques
1 Citation (Scopus)
Amyotrophic Lateral Sclerosis
Motor Cortex
Upper Extremity
Pons
Disease Progression
1 Citation (Scopus)

NMR shutter-speed elucidates apparent population inversion of 1 H 2 O signals due to active transmembrane water cycling

Li, X., Mangia, S., Lee, J. H., Bai, R. & Springer, C. S., Jul 1 2019, In : Magnetic resonance in medicine. 82, 1, p. 411-424 14 p.

Research output: Contribution to journalArticle

Water
Population
Sodium-Potassium-Exchanging ATPase
Magnetic Fields
Contrast Media

Nyquist ghost correction of breast diffusion weighted imaging using referenceless methods

McKay, J. A., Moeller, S., Zhang, L., Auerbach, E. J., Nelson, M. & Bolan, P. J., Apr 1 2019, In : Magnetic resonance in medicine. 81, 4, p. 2624-2631 8 p.

Research output: Contribution to journalArticle

Open Access
Breast
Masks
Calibration
Linear Models
Respiration

Optimizing BOLD sensitivity in the 7T Human Connectome Project resting-state fMRI protocol using plug-and-play parallel transmission

Gras, V., Poser, B. A., Wu, X., Tomi-Tricot, R. & Boulant, N., Jul 15 2019, In : NeuroImage. 195, p. 1-10 10 p.

Research output: Contribution to journalArticle

Connectome
Magnetic Resonance Imaging
Brain
Signal-To-Noise Ratio
Temporal Lobe

Proceedings of the Sixth Deep Brain Stimulation Think Tank Modulation of Brain Networks and Application of Advanced Neuroimaging, Neurophysiology, and Optogenetics

Ramirez-Zamora, A., Giordano, J., Boyden, E. S., Gradinaru, V., Gunduz, A., Starr, P. A., Sheth, S. A., McIntyre, C. C., Fox, M. D., Vitek, J. L., Vedam-Mai, V., Akbar, U., Almeida, L., Bronte-Stewart, H. M., Mayberg, H. S., Pouratian, N., Gittis, A. H., Singer, A. C., Creed, M. C., Lazaro-Munoz, G. & 14 others, Richardson, M., Rossi, M. A., Cendejas-Zaragoza, L., D’Haese, P. F., Chiong, W., Gilron, R., Chizeck, H., Ko, A., Baker, K. B., Wagenaar, J., Harel, N., Deeb, W., Foote, K. D. & Okun, M. S., Sep 12 2019, In : Frontiers in Neuroscience. 13, 936.

Research output: Contribution to journalArticle

Open Access
Optogenetics
Neurophysiology
Deep Brain Stimulation
Neuroimaging
Brain
2 Citations (Scopus)

Processing complexity increases in superficial layers of human primary auditory cortex

Moerel, M., De Martino, F., Ugurbil, K., Yacoub, E. & Formisano, E., Dec 1 2019, In : Scientific reports. 9, 1, 5502.

Research output: Contribution to journalArticle

Open Access
Auditory Cortex
Neocortex
Magnetic Resonance Imaging
Sensitivity and Specificity
Brain
Magnetic Resonance Spectroscopy
Brain
Signal-To-Noise Ratio
Prefrontal Cortex
Water
Spatial Analysis
Signal-To-Noise Ratio
Noise
Signal to noise ratio
Magnetic Resonance Imaging
Knee Replacement Arthroplasties

Recommendations towards standards for quantitative MRI (qMRI) and outstanding needs

Keenan, K. E., Biller, J. R., Delfino, J. G., Boss, M. A., Does, M. D., Evelhoch, J. L., Griswold, M. A., Gunter, J. L., Hinks, R. S., Hoffman, S. W., Kim, G., Lattanzi, R., Li, X., Marinelli, L., Metzger, G., Mukherjee, P., Nordstrom, R. J., Peskin, A. P., Perez, E., Russek, S. E. & 10 others, Sahiner, B., Serkova, N., Shukla-Dave, A., Steckner, M., Stupic, K. F., Wilmes, L. J., Wu, H. H., Zhang, H., Jackson, E. F. & Sullivan, D. C., Jun 1 2019, In : Journal of Magnetic Resonance Imaging. 49, 7, p. e26-e39

Research output: Contribution to journalArticle

8 Citations (Scopus)
Open Access
Learning
Databases
Noise
Imaging Phantoms
Neuroimaging

Sensitivity of Volumetric Magnetic Resonance Imaging and Magnetic Resonance Spectroscopy to Progression of Spinocerebellar Ataxia Type 1

Deelchand, D. K., Joers, J. M., Ravishankar, A., Lyu, T., Emir, U. E., Hutter, D., Gomez, C. M., Bushara, K. O., Lenglet, C., Eberly, L. E. & Oz, G., Sep 1 2019, In : Movement Disorders Clinical Practice. 6, 7, p. 549-558 10 p.

Research output: Contribution to journalArticle

Spinocerebellar Ataxias
Ataxia
Magnetic Resonance Spectroscopy
Magnetic Resonance Imaging
Disease Progression